Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC26.85■■□□□ 1.89
Rpap1Q80TE0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC26.85■■□□□ 1.89
Rpap1Q80TE0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Rpap1Q80TE0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Rpap1Q80TE0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Rpap1Q80TE0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC26.85■■□□□ 1.89
Rpap1Q80TE0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
Rpap1Q80TE0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC26.85■■□□□ 1.89
Rpap1Q80TE0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC26.84■■□□□ 1.89
Rpap1Q80TE0 AC125350.1-201ENSMUST00000225115 903 ntBASIC26.84■■□□□ 1.89
Rpap1Q80TE0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC26.84■■□□□ 1.89
Rpap1Q80TE0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Rpap1Q80TE0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Rpap1Q80TE0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Rpap1Q80TE0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Rpap1Q80TE0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Rpap1Q80TE0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
Rpap1Q80TE0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Rpap1Q80TE0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC26.83■■□□□ 1.89
Rpap1Q80TE0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Rpap1Q80TE0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC26.83■■□□□ 1.89
Rpap1Q80TE0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Rpap1Q80TE0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Rpap1Q80TE0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Rpap1Q80TE0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Rpap1Q80TE0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Rpap1Q80TE0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Rpap1Q80TE0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Rpap1Q80TE0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Rpap1Q80TE0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
Rpap1Q80TE0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rpap1Q80TE0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
Rpap1Q80TE0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
Rpap1Q80TE0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC26.82■■□□□ 1.88
Rpap1Q80TE0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rpap1Q80TE0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Rpap1Q80TE0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC26.82■■□□□ 1.88
Rpap1Q80TE0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC26.82■■□□□ 1.88
Rpap1Q80TE0 Gm27525-201ENSMUST00000184465 107 ntBASIC26.82■■□□□ 1.88
Rpap1Q80TE0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rpap1Q80TE0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC26.82■■□□□ 1.88
Rpap1Q80TE0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC26.82■■□□□ 1.88
Rpap1Q80TE0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rpap1Q80TE0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC26.82■■□□□ 1.88
Rpap1Q80TE0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rpap1Q80TE0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rpap1Q80TE0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rpap1Q80TE0 Gm18733-201ENSMUST00000173950 856 ntBASIC26.82■■□□□ 1.88
Rpap1Q80TE0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Rpap1Q80TE0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rpap1Q80TE0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rpap1Q80TE0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rpap1Q80TE0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rpap1Q80TE0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rpap1Q80TE0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
Rpap1Q80TE0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rpap1Q80TE0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rpap1Q80TE0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rpap1Q80TE0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rpap1Q80TE0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Rpap1Q80TE0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rpap1Q80TE0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rpap1Q80TE0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rpap1Q80TE0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC26.8■■□□□ 1.88
Rpap1Q80TE0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rpap1Q80TE0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rpap1Q80TE0 Gm5712-201ENSMUST00000199748 1043 ntBASIC26.8■■□□□ 1.88
Rpap1Q80TE0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC26.8■■□□□ 1.88
Rpap1Q80TE0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rpap1Q80TE0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Rpap1Q80TE0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Rpap1Q80TE0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Rpap1Q80TE0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Rpap1Q80TE0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Rpap1Q80TE0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Rpap1Q80TE0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC26.79■■□□□ 1.88
Rpap1Q80TE0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Rpap1Q80TE0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Rpap1Q80TE0 Gm11336-201ENSMUST00000118168 334 ntBASIC26.79■■□□□ 1.88
Rpap1Q80TE0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC26.79■■□□□ 1.88
Rpap1Q80TE0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Rpap1Q80TE0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC26.79■■□□□ 1.88
Rpap1Q80TE0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Rpap1Q80TE0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Rpap1Q80TE0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
Rpap1Q80TE0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC26.79■■□□□ 1.88
Rpap1Q80TE0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Rpap1Q80TE0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Rpap1Q80TE0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rpap1Q80TE0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rpap1Q80TE0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC26.78■■□□□ 1.88
Rpap1Q80TE0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Rpap1Q80TE0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rpap1Q80TE0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC26.78■■□□□ 1.88
Rpap1Q80TE0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
Rpap1Q80TE0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rpap1Q80TE0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rpap1Q80TE0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rpap1Q80TE0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rpap1Q80TE0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms