Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm2274-201ENSMUST00000184539 609 ntBASIC17.09■□□□□ 0.33
Pcdh8Q7TSK3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh8Q7TSK3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdh8Q7TSK3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh8Q7TSK3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdh8Q7TSK3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh8Q7TSK3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdh8Q7TSK3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh8Q7TSK3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh8Q7TSK3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh8Q7TSK3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh8Q7TSK3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh8Q7TSK3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Pcdh8Q7TSK3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh8Q7TSK3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh8Q7TSK3 Gm13401-201ENSMUST00000117074 291 ntBASIC17.08■□□□□ 0.32
Pcdh8Q7TSK3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.08■□□□□ 0.32
Pcdh8Q7TSK3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.08■□□□□ 0.32
Pcdh8Q7TSK3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Pcdh8Q7TSK3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh8Q7TSK3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh8Q7TSK3 Fst-202ENSMUST00000223640 2612 ntBASIC17.08■□□□□ 0.32
Pcdh8Q7TSK3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Pcdh8Q7TSK3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh8Q7TSK3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh8Q7TSK3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh8Q7TSK3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh8Q7TSK3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh8Q7TSK3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh8Q7TSK3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.05■□□□□ 0.32
Pcdh8Q7TSK3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh8Q7TSK3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh8Q7TSK3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh8Q7TSK3 Mir5130-201ENSMUST00000175160 84 ntBASIC17.05■□□□□ 0.32
Pcdh8Q7TSK3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Pcdh8Q7TSK3 Gm45058-201ENSMUST00000205810 766 ntBASIC17.05■□□□□ 0.32
Pcdh8Q7TSK3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdh8Q7TSK3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh8Q7TSK3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh8Q7TSK3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh8Q7TSK3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh8Q7TSK3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh8Q7TSK3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh8Q7TSK3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Pcdh8Q7TSK3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pcdh8Q7TSK3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdh8Q7TSK3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh8Q7TSK3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdh8Q7TSK3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh8Q7TSK3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh8Q7TSK3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh8Q7TSK3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdh8Q7TSK3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms