Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Otub1Q7TQI3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Otub1Q7TQI3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Otub1Q7TQI3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Otub1Q7TQI3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.5■□□□□ 0.23
Otub1Q7TQI3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Otub1Q7TQI3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Otub1Q7TQI3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Otub1Q7TQI3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Otub1Q7TQI3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Otub1Q7TQI3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Otub1Q7TQI3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Otub1Q7TQI3 Gm4968-201ENSMUST00000071458 858 ntBASIC16.49■□□□□ 0.23
Otub1Q7TQI3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Otub1Q7TQI3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Otub1Q7TQI3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Otub1Q7TQI3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Otub1Q7TQI3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Otub1Q7TQI3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Otub1Q7TQI3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Otub1Q7TQI3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Otub1Q7TQI3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Gm2559-201ENSMUST00000201323 363 ntBASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Otub1Q7TQI3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Otub1Q7TQI3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Otub1Q7TQI3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Otub1Q7TQI3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Otub1Q7TQI3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.47■□□□□ 0.23
Otub1Q7TQI3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Otub1Q7TQI3 Gm27275-201ENSMUST00000184318 272 ntBASIC16.47■□□□□ 0.23
Otub1Q7TQI3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.47■□□□□ 0.23
Otub1Q7TQI3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Otub1Q7TQI3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Otub1Q7TQI3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Otub1Q7TQI3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Otub1Q7TQI3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Otub1Q7TQI3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Otub1Q7TQI3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.46■□□□□ 0.23
Otub1Q7TQI3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Otub1Q7TQI3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Otub1Q7TQI3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Otub1Q7TQI3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.46■□□□□ 0.23
Otub1Q7TQI3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.46■□□□□ 0.23
Otub1Q7TQI3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Otub1Q7TQI3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Otub1Q7TQI3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Otub1Q7TQI3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Otub1Q7TQI3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Otub1Q7TQI3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Otub1Q7TQI3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.46■□□□□ 0.23
Otub1Q7TQI3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Otub1Q7TQI3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Otub1Q7TQI3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.46■□□□□ 0.23
Otub1Q7TQI3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Otub1Q7TQI3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Otub1Q7TQI3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Otub1Q7TQI3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Otub1Q7TQI3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Otub1Q7TQI3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Otub1Q7TQI3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Otub1Q7TQI3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.45■□□□□ 0.22
Otub1Q7TQI3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.45■□□□□ 0.22
Otub1Q7TQI3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.45■□□□□ 0.22
Otub1Q7TQI3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.45■□□□□ 0.22
Otub1Q7TQI3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Otub1Q7TQI3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Otub1Q7TQI3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Otub1Q7TQI3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Otub1Q7TQI3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Otub1Q7TQI3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Otub1Q7TQI3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Otub1Q7TQI3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Otub1Q7TQI3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Otub1Q7TQI3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.44■□□□□ 0.22
Otub1Q7TQI3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Otub1Q7TQI3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Otub1Q7TQI3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms