Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx4Q7TNK1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx4Q7TNK1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx4Q7TNK1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx4Q7TNK1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx4Q7TNK1 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.66■□□□□ 0.26
Rfx4Q7TNK1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx4Q7TNK1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfx4Q7TNK1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rfx4Q7TNK1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rfx4Q7TNK1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rfx4Q7TNK1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Gm13234-201ENSMUST00000120010 747 ntBASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx4Q7TNK1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx4Q7TNK1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx4Q7TNK1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx4Q7TNK1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx4Q7TNK1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx4Q7TNK1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx4Q7TNK1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx4Q7TNK1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Rfx4Q7TNK1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx4Q7TNK1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx4Q7TNK1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Rfx4Q7TNK1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx4Q7TNK1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx4Q7TNK1 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.62■□□□□ 0.25
Rfx4Q7TNK1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms