Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vma21Q78T54 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vma21Q78T54 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vma21Q78T54 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vma21Q78T54 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vma21Q78T54 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vma21Q78T54 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vma21Q78T54 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.13□□□□□ -0.15
Vma21Q78T54 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vma21Q78T54 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vma21Q78T54 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vma21Q78T54 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vma21Q78T54 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vma21Q78T54 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vma21Q78T54 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.13□□□□□ -0.15
Vma21Q78T54 Gm42569-201ENSMUST00000200539 472 ntBASIC14.13□□□□□ -0.15
Vma21Q78T54 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.13□□□□□ -0.15
Vma21Q78T54 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.13□□□□□ -0.15
Vma21Q78T54 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vma21Q78T54 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vma21Q78T54 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vma21Q78T54 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vma21Q78T54 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vma21Q78T54 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vma21Q78T54 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vma21Q78T54 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vma21Q78T54 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.12□□□□□ -0.15
Vma21Q78T54 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vma21Q78T54 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vma21Q78T54 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.12□□□□□ -0.15
Vma21Q78T54 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vma21Q78T54 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vma21Q78T54 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vma21Q78T54 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vma21Q78T54 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vma21Q78T54 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vma21Q78T54 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Vma21Q78T54 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vma21Q78T54 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Vma21Q78T54 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.12□□□□□ -0.15
Vma21Q78T54 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vma21Q78T54 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vma21Q78T54 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.12□□□□□ -0.15
Vma21Q78T54 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.12□□□□□ -0.15
Vma21Q78T54 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.11□□□□□ -0.15
Vma21Q78T54 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vma21Q78T54 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.11□□□□□ -0.15
Vma21Q78T54 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vma21Q78T54 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.11□□□□□ -0.15
Vma21Q78T54 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vma21Q78T54 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vma21Q78T54 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vma21Q78T54 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vma21Q78T54 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vma21Q78T54 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vma21Q78T54 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vma21Q78T54 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vma21Q78T54 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vma21Q78T54 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.11□□□□□ -0.15
Vma21Q78T54 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vma21Q78T54 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vma21Q78T54 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vma21Q78T54 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vma21Q78T54 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vma21Q78T54 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vma21Q78T54 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vma21Q78T54 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vma21Q78T54 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vma21Q78T54 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vma21Q78T54 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vma21Q78T54 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Vma21Q78T54 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vma21Q78T54 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Vma21Q78T54 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vma21Q78T54 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Vma21Q78T54 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vma21Q78T54 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vma21Q78T54 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vma21Q78T54 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vma21Q78T54 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vma21Q78T54 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Vma21Q78T54 Gm18284-201ENSMUST00000172604 624 ntBASIC14.1□□□□□ -0.15
Vma21Q78T54 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Vma21Q78T54 Mir8112-201ENSMUST00000184382 131 ntBASIC14.1□□□□□ -0.15
Vma21Q78T54 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vma21Q78T54 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vma21Q78T54 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vma21Q78T54 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vma21Q78T54 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vma21Q78T54 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Vma21Q78T54 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.1□□□□□ -0.15
Vma21Q78T54 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vma21Q78T54 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vma21Q78T54 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Vma21Q78T54 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vma21Q78T54 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vma21Q78T54 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vma21Q78T54 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vma21Q78T54 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vma21Q78T54 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms