Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cspg5Q71M36 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cspg5Q71M36 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cspg5Q71M36 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.93■□□□□ 0.46
Cspg5Q71M36 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Cspg5Q71M36 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cspg5Q71M36 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cspg5Q71M36 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.93■□□□□ 0.46
Cspg5Q71M36 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cspg5Q71M36 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.93■□□□□ 0.46
Cspg5Q71M36 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cspg5Q71M36 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cspg5Q71M36 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cspg5Q71M36 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cspg5Q71M36 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cspg5Q71M36 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cspg5Q71M36 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cspg5Q71M36 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cspg5Q71M36 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.92■□□□□ 0.46
Cspg5Q71M36 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.92■□□□□ 0.46
Cspg5Q71M36 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.92■□□□□ 0.46
Cspg5Q71M36 Gm18032-201ENSMUST00000222541 538 ntBASIC17.92■□□□□ 0.46
Cspg5Q71M36 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cspg5Q71M36 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cspg5Q71M36 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cspg5Q71M36 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cspg5Q71M36 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cspg5Q71M36 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cspg5Q71M36 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cspg5Q71M36 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cspg5Q71M36 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cspg5Q71M36 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cspg5Q71M36 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cspg5Q71M36 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cspg5Q71M36 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cspg5Q71M36 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.91■□□□□ 0.46
Cspg5Q71M36 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cspg5Q71M36 Gm9103-201ENSMUST00000119371 405 ntBASIC17.91■□□□□ 0.46
Cspg5Q71M36 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cspg5Q71M36 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.91■□□□□ 0.46
Cspg5Q71M36 Gm18101-201ENSMUST00000215769 548 ntBASIC17.91■□□□□ 0.46
Cspg5Q71M36 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cspg5Q71M36 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cspg5Q71M36 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cspg5Q71M36 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cspg5Q71M36 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cspg5Q71M36 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cspg5Q71M36 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.91■□□□□ 0.46
Cspg5Q71M36 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cspg5Q71M36 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cspg5Q71M36 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cspg5Q71M36 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cspg5Q71M36 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cspg5Q71M36 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.9■□□□□ 0.46
Cspg5Q71M36 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cspg5Q71M36 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cspg5Q71M36 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cspg5Q71M36 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cspg5Q71M36 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cspg5Q71M36 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cspg5Q71M36 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cspg5Q71M36 Gm7284-201ENSMUST00000131667 944 ntBASIC17.9■□□□□ 0.46
Cspg5Q71M36 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cspg5Q71M36 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cspg5Q71M36 Gm22697-201ENSMUST00000175194 63 ntBASIC17.9■□□□□ 0.46
Cspg5Q71M36 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cspg5Q71M36 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cspg5Q71M36 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cspg5Q71M36 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cspg5Q71M36 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cspg5Q71M36 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cspg5Q71M36 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cspg5Q71M36 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Cspg5Q71M36 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Cspg5Q71M36 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cspg5Q71M36 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cspg5Q71M36 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cspg5Q71M36 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cspg5Q71M36 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cspg5Q71M36 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.89■□□□□ 0.45
Cspg5Q71M36 Gm2274-201ENSMUST00000184539 609 ntBASIC17.89■□□□□ 0.45
Cspg5Q71M36 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.89■□□□□ 0.45
Cspg5Q71M36 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cspg5Q71M36 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cspg5Q71M36 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cspg5Q71M36 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cspg5Q71M36 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cspg5Q71M36 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cspg5Q71M36 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cspg5Q71M36 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cspg5Q71M36 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cspg5Q71M36 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cspg5Q71M36 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.88■□□□□ 0.45
Cspg5Q71M36 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cspg5Q71M36 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cspg5Q71M36 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.88■□□□□ 0.45
Cspg5Q71M36 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Cspg5Q71M36 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cspg5Q71M36 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cspg5Q71M36 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms