Protein–RNA interactions for Protein: Q6X893

Slc44a1, Choline transporter-like protein 1, mousemouse

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1Q6X893 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Gm43799-201ENSMUST00000201845 579 ntBASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc44a1Q6X893 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc44a1Q6X893 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Slc44a1Q6X893 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc44a1Q6X893 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Slc44a1Q6X893 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Slc44a1Q6X893 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc44a1Q6X893 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc44a1Q6X893 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Slc44a1Q6X893 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.06■□□□□ 0.8
Slc44a1Q6X893 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Slc44a1Q6X893 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc44a1Q6X893 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc44a1Q6X893 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc44a1Q6X893 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Slc44a1Q6X893 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Slc44a1Q6X893 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc44a1Q6X893 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Slc44a1Q6X893 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc44a1Q6X893 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc44a1Q6X893 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc44a1Q6X893 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc44a1Q6X893 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc44a1Q6X893 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc44a1Q6X893 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc44a1Q6X893 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc44a1Q6X893 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc44a1Q6X893 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc44a1Q6X893 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Slc44a1Q6X893 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc44a1Q6X893 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc44a1Q6X893 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc44a1Q6X893 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc44a1Q6X893 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc44a1Q6X893 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Slc44a1Q6X893 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc44a1Q6X893 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc44a1Q6X893 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc44a1Q6X893 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slc44a1Q6X893 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Slc44a1Q6X893 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc44a1Q6X893 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slc44a1Q6X893 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.04■□□□□ 0.8
Slc44a1Q6X893 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Slc44a1Q6X893 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc44a1Q6X893 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Slc44a1Q6X893 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc44a1Q6X893 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc44a1Q6X893 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc44a1Q6X893 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.03■□□□□ 0.8
Slc44a1Q6X893 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc44a1Q6X893 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.03■□□□□ 0.8
Slc44a1Q6X893 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc44a1Q6X893 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc44a1Q6X893 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Slc44a1Q6X893 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Slc44a1Q6X893 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slc44a1Q6X893 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.03■□□□□ 0.8
Slc44a1Q6X893 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc44a1Q6X893 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc44a1Q6X893 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.03■□□□□ 0.8
Slc44a1Q6X893 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc44a1Q6X893 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slc44a1Q6X893 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc44a1Q6X893 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc44a1Q6X893 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Slc44a1Q6X893 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc44a1Q6X893 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.02■□□□□ 0.8
Slc44a1Q6X893 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc44a1Q6X893 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Slc44a1Q6X893 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc44a1Q6X893 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.02■□□□□ 0.8
Slc44a1Q6X893 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.02■□□□□ 0.8
Slc44a1Q6X893 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.02■□□□□ 0.8
Slc44a1Q6X893 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc44a1Q6X893 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms