Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chd4Q6PDQ2 AC133598.3-202ENSMUST00000224219 531 ntBASIC22.65■■□□□ 1.22
Chd4Q6PDQ2 Gm7461-201ENSMUST00000058918 827 ntBASIC22.65■■□□□ 1.22
Chd4Q6PDQ2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Chd4Q6PDQ2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chd4Q6PDQ2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chd4Q6PDQ2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Chd4Q6PDQ2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chd4Q6PDQ2 Gm13186-201ENSMUST00000118031 316 ntBASIC22.65■■□□□ 1.22
Chd4Q6PDQ2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chd4Q6PDQ2 Gm44450-201ENSMUST00000199528 114 ntBASIC22.65■■□□□ 1.22
Chd4Q6PDQ2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC22.65■■□□□ 1.22
Chd4Q6PDQ2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
Chd4Q6PDQ2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Chd4Q6PDQ2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Chd4Q6PDQ2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Chd4Q6PDQ2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Chd4Q6PDQ2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Chd4Q6PDQ2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC22.64■■□□□ 1.21
Chd4Q6PDQ2 AC122351.1-201ENSMUST00000220467 126 ntBASIC22.64■■□□□ 1.21
Chd4Q6PDQ2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Chd4Q6PDQ2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Chd4Q6PDQ2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Chd4Q6PDQ2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Chd4Q6PDQ2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Chd4Q6PDQ2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Chd4Q6PDQ2 Gm18115-201ENSMUST00000221209 621 ntBASIC22.63■■□□□ 1.21
Chd4Q6PDQ2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chd4Q6PDQ2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chd4Q6PDQ2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chd4Q6PDQ2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Chd4Q6PDQ2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chd4Q6PDQ2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC22.63■■□□□ 1.21
Chd4Q6PDQ2 Gm45328-201ENSMUST00000210942 917 ntBASIC22.63■■□□□ 1.21
Chd4Q6PDQ2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC22.63■■□□□ 1.21
Chd4Q6PDQ2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Chd4Q6PDQ2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Chd4Q6PDQ2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC22.62■■□□□ 1.21
Chd4Q6PDQ2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Chd4Q6PDQ2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
Chd4Q6PDQ2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Chd4Q6PDQ2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Chd4Q6PDQ2 Gm6623-201ENSMUST00000173570 544 ntBASIC22.62■■□□□ 1.21
Chd4Q6PDQ2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Chd4Q6PDQ2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Chd4Q6PDQ2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC22.61■■□□□ 1.21
Chd4Q6PDQ2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Chd4Q6PDQ2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Chd4Q6PDQ2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC22.61■■□□□ 1.21
Chd4Q6PDQ2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Chd4Q6PDQ2 Mir3081-201ENSMUST00000175305 84 ntBASIC22.61■■□□□ 1.21
Chd4Q6PDQ2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Chd4Q6PDQ2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC22.61■■□□□ 1.21
Chd4Q6PDQ2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Chd4Q6PDQ2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Chd4Q6PDQ2 Gm5953-201ENSMUST00000220644 2616 ntBASIC22.61■■□□□ 1.21
Chd4Q6PDQ2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Chd4Q6PDQ2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Chd4Q6PDQ2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Chd4Q6PDQ2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC22.6■■□□□ 1.21
Chd4Q6PDQ2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Chd4Q6PDQ2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
Chd4Q6PDQ2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Chd4Q6PDQ2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Chd4Q6PDQ2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Chd4Q6PDQ2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Chd4Q6PDQ2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC22.6■■□□□ 1.21
Chd4Q6PDQ2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC22.59■■□□□ 1.21
Chd4Q6PDQ2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Chd4Q6PDQ2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Chd4Q6PDQ2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC22.59■■□□□ 1.21
Chd4Q6PDQ2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Chd4Q6PDQ2 AC153889.1-201ENSMUST00000219257 330 ntBASIC22.59■■□□□ 1.21
Chd4Q6PDQ2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Chd4Q6PDQ2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Chd4Q6PDQ2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Chd4Q6PDQ2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
Chd4Q6PDQ2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC22.58■■□□□ 1.21
Chd4Q6PDQ2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Chd4Q6PDQ2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Chd4Q6PDQ2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Chd4Q6PDQ2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC22.57■■□□□ 1.2
Chd4Q6PDQ2 Gm24589-201ENSMUST00000116692 94 ntBASIC22.57■■□□□ 1.2
Chd4Q6PDQ2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Chd4Q6PDQ2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC22.57■■□□□ 1.2
Chd4Q6PDQ2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Chd4Q6PDQ2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Chd4Q6PDQ2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Chd4Q6PDQ2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Chd4Q6PDQ2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC22.56■■□□□ 1.2
Chd4Q6PDQ2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC22.56■■□□□ 1.2
Chd4Q6PDQ2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC22.56■■□□□ 1.2
Chd4Q6PDQ2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC22.56■■□□□ 1.2
Chd4Q6PDQ2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Chd4Q6PDQ2 AC124569.2-201ENSMUST00000225998 818 ntBASIC22.56■■□□□ 1.2
Chd4Q6PDQ2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Chd4Q6PDQ2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Chd4Q6PDQ2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Chd4Q6PDQ2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Chd4Q6PDQ2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms