Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm10418-201ENSMUST00000100943 576 ntBASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Flg-201ENSMUST00000050758 1488 ntBASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Smarcd3Q6P9Z1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.9■□□□□ 0.14
Smarcd3Q6P9Z1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd3Q6P9Z1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd3Q6P9Z1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd3Q6P9Z1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd3Q6P9Z1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd3Q6P9Z1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.9■□□□□ 0.14
Smarcd3Q6P9Z1 Gm27405-201ENSMUST00000184201 112 ntBASIC15.9■□□□□ 0.14
Smarcd3Q6P9Z1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Smarcd3Q6P9Z1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd3Q6P9Z1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd3Q6P9Z1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd3Q6P9Z1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd3Q6P9Z1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd3Q6P9Z1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.9■□□□□ 0.14
Smarcd3Q6P9Z1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd3Q6P9Z1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd3Q6P9Z1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd3Q6P9Z1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd3Q6P9Z1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.89■□□□□ 0.13
Smarcd3Q6P9Z1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd3Q6P9Z1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.89■□□□□ 0.13
Smarcd3Q6P9Z1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd3Q6P9Z1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.89■□□□□ 0.13
Smarcd3Q6P9Z1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd3Q6P9Z1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.89■□□□□ 0.13
Smarcd3Q6P9Z1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd3Q6P9Z1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd3Q6P9Z1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd3Q6P9Z1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 Mir8112-201ENSMUST00000184382 131 ntBASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 Gm26524-201ENSMUST00000192339 390 ntBASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Smarcd3Q6P9Z1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms