Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp49Q6P9L4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp49Q6P9L4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Usp49Q6P9L4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp49Q6P9L4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Usp49Q6P9L4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Usp49Q6P9L4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Usp49Q6P9L4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Usp49Q6P9L4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp49Q6P9L4 Gm24841-201ENSMUST00000158676 357 ntBASIC19.38■□□□□ 0.69
Usp49Q6P9L4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.38■□□□□ 0.69
Usp49Q6P9L4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp49Q6P9L4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.38■□□□□ 0.69
Usp49Q6P9L4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp49Q6P9L4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp49Q6P9L4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp49Q6P9L4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Usp49Q6P9L4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp49Q6P9L4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp49Q6P9L4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp49Q6P9L4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Usp49Q6P9L4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp49Q6P9L4 Gm10252-201ENSMUST00000209541 832 ntBASIC19.37■□□□□ 0.69
Usp49Q6P9L4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp49Q6P9L4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp49Q6P9L4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Usp49Q6P9L4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp49Q6P9L4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Usp49Q6P9L4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp49Q6P9L4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp49Q6P9L4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp49Q6P9L4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp49Q6P9L4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Usp49Q6P9L4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp49Q6P9L4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp49Q6P9L4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Usp49Q6P9L4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp49Q6P9L4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Usp49Q6P9L4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp49Q6P9L4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.36■□□□□ 0.69
Usp49Q6P9L4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp49Q6P9L4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp49Q6P9L4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Usp49Q6P9L4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp49Q6P9L4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Usp49Q6P9L4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp49Q6P9L4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp49Q6P9L4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp49Q6P9L4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.35■□□□□ 0.69
Usp49Q6P9L4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Usp49Q6P9L4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp49Q6P9L4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp49Q6P9L4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp49Q6P9L4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp49Q6P9L4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.35■□□□□ 0.69
Usp49Q6P9L4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp49Q6P9L4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.35■□□□□ 0.69
Usp49Q6P9L4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp49Q6P9L4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp49Q6P9L4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp49Q6P9L4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Usp49Q6P9L4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp49Q6P9L4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.35■□□□□ 0.69
Usp49Q6P9L4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp49Q6P9L4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp49Q6P9L4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp49Q6P9L4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.34■□□□□ 0.69
Usp49Q6P9L4 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.34■□□□□ 0.69
Usp49Q6P9L4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.34■□□□□ 0.69
Usp49Q6P9L4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp49Q6P9L4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp49Q6P9L4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp49Q6P9L4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Usp49Q6P9L4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp49Q6P9L4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.33■□□□□ 0.68
Usp49Q6P9L4 Gm8520-201ENSMUST00000186517 868 ntBASIC19.33■□□□□ 0.68
Usp49Q6P9L4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp49Q6P9L4 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.33■□□□□ 0.68
Usp49Q6P9L4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Usp49Q6P9L4 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.33■□□□□ 0.68
Usp49Q6P9L4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp49Q6P9L4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp49Q6P9L4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp49Q6P9L4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp49Q6P9L4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp49Q6P9L4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp49Q6P9L4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp49Q6P9L4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.32■□□□□ 0.68
Usp49Q6P9L4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp49Q6P9L4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp49Q6P9L4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp49Q6P9L4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Usp49Q6P9L4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.32■□□□□ 0.68
Usp49Q6P9L4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp49Q6P9L4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.32■□□□□ 0.68
Usp49Q6P9L4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp49Q6P9L4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp49Q6P9L4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp49Q6P9L4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp49Q6P9L4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms