Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smchd1Q6P5D8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Smchd1Q6P5D8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smchd1Q6P5D8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smchd1Q6P5D8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smchd1Q6P5D8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.05■□□□□ 0.64
Smchd1Q6P5D8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smchd1Q6P5D8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Smchd1Q6P5D8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smchd1Q6P5D8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smchd1Q6P5D8 Mir5130-201ENSMUST00000175160 84 ntBASIC19.05■□□□□ 0.64
Smchd1Q6P5D8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Smchd1Q6P5D8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smchd1Q6P5D8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smchd1Q6P5D8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smchd1Q6P5D8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smchd1Q6P5D8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smchd1Q6P5D8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smchd1Q6P5D8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smchd1Q6P5D8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smchd1Q6P5D8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smchd1Q6P5D8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.04■□□□□ 0.64
Smchd1Q6P5D8 Gm13474-201ENSMUST00000122466 815 ntBASIC19.04■□□□□ 0.64
Smchd1Q6P5D8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smchd1Q6P5D8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Smchd1Q6P5D8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smchd1Q6P5D8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smchd1Q6P5D8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smchd1Q6P5D8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.03■□□□□ 0.64
Smchd1Q6P5D8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smchd1Q6P5D8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Smchd1Q6P5D8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.03■□□□□ 0.64
Smchd1Q6P5D8 Ank2-226ENSMUST00000189368 339 ntBASIC19.03■□□□□ 0.64
Smchd1Q6P5D8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.03■□□□□ 0.64
Smchd1Q6P5D8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Smchd1Q6P5D8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smchd1Q6P5D8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Smchd1Q6P5D8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smchd1Q6P5D8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.03■□□□□ 0.64
Smchd1Q6P5D8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smchd1Q6P5D8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smchd1Q6P5D8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Smchd1Q6P5D8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smchd1Q6P5D8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.03■□□□□ 0.64
Smchd1Q6P5D8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smchd1Q6P5D8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Smchd1Q6P5D8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smchd1Q6P5D8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Smchd1Q6P5D8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smchd1Q6P5D8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smchd1Q6P5D8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.02■□□□□ 0.64
Smchd1Q6P5D8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smchd1Q6P5D8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smchd1Q6P5D8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smchd1Q6P5D8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smchd1Q6P5D8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Smchd1Q6P5D8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Smchd1Q6P5D8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Smchd1Q6P5D8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smchd1Q6P5D8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
Smchd1Q6P5D8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smchd1Q6P5D8 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.02■□□□□ 0.63
Smchd1Q6P5D8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.01■□□□□ 0.63
Smchd1Q6P5D8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smchd1Q6P5D8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.01■□□□□ 0.63
Smchd1Q6P5D8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Smchd1Q6P5D8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
Smchd1Q6P5D8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smchd1Q6P5D8 Gm7213-201ENSMUST00000215977 950 ntBASIC19.01■□□□□ 0.63
Smchd1Q6P5D8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smchd1Q6P5D8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smchd1Q6P5D8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smchd1Q6P5D8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smchd1Q6P5D8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smchd1Q6P5D8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smchd1Q6P5D8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Smchd1Q6P5D8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Smchd1Q6P5D8 Gm10459-201ENSMUST00000202708 1155 ntBASIC19■□□□□ 0.63
Smchd1Q6P5D8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smchd1Q6P5D8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smchd1Q6P5D8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smchd1Q6P5D8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19■□□□□ 0.63
Smchd1Q6P5D8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19■□□□□ 0.63
Smchd1Q6P5D8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smchd1Q6P5D8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smchd1Q6P5D8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smchd1Q6P5D8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smchd1Q6P5D8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19■□□□□ 0.63
Smchd1Q6P5D8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19■□□□□ 0.63
Smchd1Q6P5D8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Smchd1Q6P5D8 Gm33142-201ENSMUST00000193913 867 ntBASIC19■□□□□ 0.63
Smchd1Q6P5D8 Gm21362-201ENSMUST00000194272 928 ntBASIC19■□□□□ 0.63
Smchd1Q6P5D8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Smchd1Q6P5D8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smchd1Q6P5D8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smchd1Q6P5D8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smchd1Q6P5D8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smchd1Q6P5D8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smchd1Q6P5D8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Smchd1Q6P5D8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms