Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac4Q6NZM9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac4Q6NZM9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac4Q6NZM9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac4Q6NZM9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.36■□□□□ 0.69
Hdac4Q6NZM9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Hdac4Q6NZM9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac4Q6NZM9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac4Q6NZM9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac4Q6NZM9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Hdac4Q6NZM9 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.36■□□□□ 0.69
Hdac4Q6NZM9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac4Q6NZM9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac4Q6NZM9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac4Q6NZM9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac4Q6NZM9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.35■□□□□ 0.69
Hdac4Q6NZM9 Gm8520-201ENSMUST00000186517 868 ntBASIC19.35■□□□□ 0.69
Hdac4Q6NZM9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Hdac4Q6NZM9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac4Q6NZM9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac4Q6NZM9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Hdac4Q6NZM9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Hdac4Q6NZM9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac4Q6NZM9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac4Q6NZM9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.35■□□□□ 0.69
Hdac4Q6NZM9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Hdac4Q6NZM9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac4Q6NZM9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac4Q6NZM9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac4Q6NZM9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Hdac4Q6NZM9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac4Q6NZM9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac4Q6NZM9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Hdac4Q6NZM9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac4Q6NZM9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac4Q6NZM9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.34■□□□□ 0.69
Hdac4Q6NZM9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Hdac4Q6NZM9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Hdac4Q6NZM9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Hdac4Q6NZM9 Gm27011-201ENSMUST00000182352 972 ntBASIC19.34■□□□□ 0.69
Hdac4Q6NZM9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.34■□□□□ 0.69
Hdac4Q6NZM9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac4Q6NZM9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Hdac4Q6NZM9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac4Q6NZM9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdac4Q6NZM9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.33■□□□□ 0.69
Hdac4Q6NZM9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdac4Q6NZM9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdac4Q6NZM9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.33■□□□□ 0.69
Hdac4Q6NZM9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdac4Q6NZM9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac4Q6NZM9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.33■□□□□ 0.68
Hdac4Q6NZM9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac4Q6NZM9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.33■□□□□ 0.68
Hdac4Q6NZM9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.33■□□□□ 0.68
Hdac4Q6NZM9 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.33■□□□□ 0.68
Hdac4Q6NZM9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac4Q6NZM9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac4Q6NZM9 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.33■□□□□ 0.68
Hdac4Q6NZM9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac4Q6NZM9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac4Q6NZM9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Hdac4Q6NZM9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Hdac4Q6NZM9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac4Q6NZM9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac4Q6NZM9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac4Q6NZM9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Hdac4Q6NZM9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac4Q6NZM9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Hdac4Q6NZM9 Mir1199-201ENSMUST00000117015 119 ntBASIC19.32■□□□□ 0.68
Hdac4Q6NZM9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac4Q6NZM9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.32■□□□□ 0.68
Hdac4Q6NZM9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac4Q6NZM9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac4Q6NZM9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Hdac4Q6NZM9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Hdac4Q6NZM9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac4Q6NZM9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Hdac4Q6NZM9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac4Q6NZM9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac4Q6NZM9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac4Q6NZM9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Hdac4Q6NZM9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac4Q6NZM9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac4Q6NZM9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac4Q6NZM9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Hdac4Q6NZM9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hdac4Q6NZM9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hdac4Q6NZM9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hdac4Q6NZM9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hdac4Q6NZM9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.31■□□□□ 0.68
Hdac4Q6NZM9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hdac4Q6NZM9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hdac4Q6NZM9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hdac4Q6NZM9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hdac4Q6NZM9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hdac4Q6NZM9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.31■□□□□ 0.68
Hdac4Q6NZM9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac4Q6NZM9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac4Q6NZM9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms