Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf6Q6NVF9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf6Q6NVF9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf6Q6NVF9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cpsf6Q6NVF9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf6Q6NVF9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cpsf6Q6NVF9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf6Q6NVF9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cpsf6Q6NVF9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf6Q6NVF9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cpsf6Q6NVF9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf6Q6NVF9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cpsf6Q6NVF9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf6Q6NVF9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf6Q6NVF9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf6Q6NVF9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cpsf6Q6NVF9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cpsf6Q6NVF9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf6Q6NVF9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf6Q6NVF9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cpsf6Q6NVF9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf6Q6NVF9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf6Q6NVF9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cpsf6Q6NVF9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf6Q6NVF9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf6Q6NVF9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf6Q6NVF9 Gm6576-201ENSMUST00000169678 883 ntBASIC16.79■□□□□ 0.28
Cpsf6Q6NVF9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.79■□□□□ 0.28
Cpsf6Q6NVF9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.79■□□□□ 0.28
Cpsf6Q6NVF9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf6Q6NVF9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf6Q6NVF9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf6Q6NVF9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cpsf6Q6NVF9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cpsf6Q6NVF9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cpsf6Q6NVF9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.77■□□□□ 0.28
Cpsf6Q6NVF9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Cpsf6Q6NVF9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cpsf6Q6NVF9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cpsf6Q6NVF9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Cpsf6Q6NVF9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cpsf6Q6NVF9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cpsf6Q6NVF9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cpsf6Q6NVF9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cpsf6Q6NVF9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Cpsf6Q6NVF9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Cpsf6Q6NVF9 Gm12527-201ENSMUST00000117967 564 ntBASIC16.77■□□□□ 0.28
Cpsf6Q6NVF9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Cpsf6Q6NVF9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.77■□□□□ 0.28
Cpsf6Q6NVF9 Gm29257-201ENSMUST00000186115 639 ntBASIC16.77■□□□□ 0.28
Cpsf6Q6NVF9 Gm37856-201ENSMUST00000191634 999 ntBASIC16.77■□□□□ 0.28
Cpsf6Q6NVF9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cpsf6Q6NVF9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cpsf6Q6NVF9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cpsf6Q6NVF9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cpsf6Q6NVF9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cpsf6Q6NVF9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cpsf6Q6NVF9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Cpsf6Q6NVF9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cpsf6Q6NVF9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
Cpsf6Q6NVF9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cpsf6Q6NVF9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cpsf6Q6NVF9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf6Q6NVF9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf6Q6NVF9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf6Q6NVF9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Cpsf6Q6NVF9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf6Q6NVF9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.76■□□□□ 0.27
Cpsf6Q6NVF9 Trmt13-210ENSMUST00000198454 880 ntBASIC16.76■□□□□ 0.27
Cpsf6Q6NVF9 Gm42545-201ENSMUST00000202755 922 ntBASIC16.76■□□□□ 0.27
Cpsf6Q6NVF9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf6Q6NVF9 Gm18025-201ENSMUST00000221733 862 ntBASIC16.76■□□□□ 0.27
Cpsf6Q6NVF9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf6Q6NVF9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf6Q6NVF9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf6Q6NVF9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms