Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.58■□□□□ 0.4
Sp140Q6NSQ5 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Sp140Q6NSQ5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sp140Q6NSQ5 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sp140Q6NSQ5 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sp140Q6NSQ5 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sp140Q6NSQ5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.58■□□□□ 0.4
Sp140Q6NSQ5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sp140Q6NSQ5 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sp140Q6NSQ5 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sp140Q6NSQ5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sp140Q6NSQ5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sp140Q6NSQ5 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sp140Q6NSQ5 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sp140Q6NSQ5 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.57■□□□□ 0.4
Sp140Q6NSQ5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sp140Q6NSQ5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Sp140Q6NSQ5 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sp140Q6NSQ5 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sp140Q6NSQ5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Sp140Q6NSQ5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sp140Q6NSQ5 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sp140Q6NSQ5 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sp140Q6NSQ5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Sp140Q6NSQ5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sp140Q6NSQ5 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sp140Q6NSQ5 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sp140Q6NSQ5 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sp140Q6NSQ5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sp140Q6NSQ5 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.56■□□□□ 0.4
Sp140Q6NSQ5 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sp140Q6NSQ5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sp140Q6NSQ5 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sp140Q6NSQ5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Gm12382-201ENSMUST00000122005 922 ntBASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Gm10653-202ENSMUST00000139570 835 ntBASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.55■□□□□ 0.4
Sp140Q6NSQ5 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sp140Q6NSQ5 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sp140Q6NSQ5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sp140Q6NSQ5 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sp140Q6NSQ5 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sp140Q6NSQ5 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.54■□□□□ 0.4
Sp140Q6NSQ5 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sp140Q6NSQ5 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sp140Q6NSQ5 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sp140Q6NSQ5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sp140Q6NSQ5 Gm43183-201ENSMUST00000200632 547 ntBASIC17.54■□□□□ 0.4
Sp140Q6NSQ5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sp140Q6NSQ5 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sp140Q6NSQ5 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.54■□□□□ 0.4
Sp140Q6NSQ5 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Sp140Q6NSQ5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sp140Q6NSQ5 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sp140Q6NSQ5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sp140Q6NSQ5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sp140Q6NSQ5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sp140Q6NSQ5 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.53■□□□□ 0.4
Sp140Q6NSQ5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sp140Q6NSQ5 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sp140Q6NSQ5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sp140Q6NSQ5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sp140Q6NSQ5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sp140Q6NSQ5 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sp140Q6NSQ5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sp140Q6NSQ5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.53■□□□□ 0.4
Sp140Q6NSQ5 Gm5643-201ENSMUST00000117081 966 ntBASIC17.53■□□□□ 0.4
Sp140Q6NSQ5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sp140Q6NSQ5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sp140Q6NSQ5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sp140Q6NSQ5 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sp140Q6NSQ5 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sp140Q6NSQ5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sp140Q6NSQ5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Sp140Q6NSQ5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Sp140Q6NSQ5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.53■□□□□ 0.4
Sp140Q6NSQ5 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sp140Q6NSQ5 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms