Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retreg2Q6NS82 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Retreg2Q6NS82 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Retreg2Q6NS82 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Retreg2Q6NS82 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.62■□□□□ 0.57
Retreg2Q6NS82 Gm15375-201ENSMUST00000119510 849 ntBASIC18.62■□□□□ 0.57
Retreg2Q6NS82 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.62■□□□□ 0.57
Retreg2Q6NS82 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retreg2Q6NS82 Gm10138-203ENSMUST00000206952 366 ntBASIC18.62■□□□□ 0.57
Retreg2Q6NS82 Gm18025-201ENSMUST00000221733 862 ntBASIC18.62■□□□□ 0.57
Retreg2Q6NS82 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retreg2Q6NS82 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Retreg2Q6NS82 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retreg2Q6NS82 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Retreg2Q6NS82 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Retreg2Q6NS82 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retreg2Q6NS82 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retreg2Q6NS82 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retreg2Q6NS82 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retreg2Q6NS82 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Retreg2Q6NS82 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retreg2Q6NS82 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retreg2Q6NS82 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg2Q6NS82 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg2Q6NS82 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg2Q6NS82 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg2Q6NS82 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg2Q6NS82 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Retreg2Q6NS82 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg2Q6NS82 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg2Q6NS82 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg2Q6NS82 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg2Q6NS82 Gm38285-201ENSMUST00000192928 922 ntBASIC18.61■□□□□ 0.57
Retreg2Q6NS82 Gm7977-201ENSMUST00000193787 748 ntBASIC18.61■□□□□ 0.57
Retreg2Q6NS82 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.61■□□□□ 0.57
Retreg2Q6NS82 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg2Q6NS82 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg2Q6NS82 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg2Q6NS82 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg2Q6NS82 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg2Q6NS82 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg2Q6NS82 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg2Q6NS82 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.61■□□□□ 0.57
Retreg2Q6NS82 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg2Q6NS82 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg2Q6NS82 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg2Q6NS82 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg2Q6NS82 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retreg2Q6NS82 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Retreg2Q6NS82 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retreg2Q6NS82 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retreg2Q6NS82 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Retreg2Q6NS82 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retreg2Q6NS82 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retreg2Q6NS82 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.58■□□□□ 0.56
Retreg2Q6NS82 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms