Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Scube3Q66PY1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scube3Q66PY1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scube3Q66PY1 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.16■□□□□ 0.5
Scube3Q66PY1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scube3Q66PY1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scube3Q66PY1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Scube3Q66PY1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.15■□□□□ 0.5
Scube3Q66PY1 Gm43799-201ENSMUST00000201845 579 ntBASIC18.15■□□□□ 0.5
Scube3Q66PY1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.15■□□□□ 0.5
Scube3Q66PY1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Gm15823-201ENSMUST00000064305 670 ntBASIC18.15■□□□□ 0.5
Scube3Q66PY1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scube3Q66PY1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Scube3Q66PY1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Scube3Q66PY1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Scube3Q66PY1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.14■□□□□ 0.49
Scube3Q66PY1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scube3Q66PY1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scube3Q66PY1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Scube3Q66PY1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Scube3Q66PY1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scube3Q66PY1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scube3Q66PY1 Gm37025-201ENSMUST00000195159 829 ntBASIC18.14■□□□□ 0.49
Scube3Q66PY1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.14■□□□□ 0.49
Scube3Q66PY1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scube3Q66PY1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scube3Q66PY1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.14■□□□□ 0.49
Scube3Q66PY1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scube3Q66PY1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Scube3Q66PY1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scube3Q66PY1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Scube3Q66PY1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.14■□□□□ 0.49
Scube3Q66PY1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Scube3Q66PY1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scube3Q66PY1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scube3Q66PY1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Scube3Q66PY1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scube3Q66PY1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scube3Q66PY1 Gm13559-201ENSMUST00000120476 863 ntBASIC18.13■□□□□ 0.49
Scube3Q66PY1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.13■□□□□ 0.49
Scube3Q66PY1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Scube3Q66PY1 Gm27463-201ENSMUST00000183569 57 ntBASIC18.13■□□□□ 0.49
Scube3Q66PY1 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.13■□□□□ 0.49
Scube3Q66PY1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Scube3Q66PY1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scube3Q66PY1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scube3Q66PY1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Scube3Q66PY1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scube3Q66PY1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scube3Q66PY1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.13■□□□□ 0.49
Scube3Q66PY1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scube3Q66PY1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scube3Q66PY1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scube3Q66PY1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scube3Q66PY1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scube3Q66PY1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scube3Q66PY1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scube3Q66PY1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Scube3Q66PY1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scube3Q66PY1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Scube3Q66PY1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scube3Q66PY1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scube3Q66PY1 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.12■□□□□ 0.49
Scube3Q66PY1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scube3Q66PY1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scube3Q66PY1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.12■□□□□ 0.49
Scube3Q66PY1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scube3Q66PY1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scube3Q66PY1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scube3Q66PY1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scube3Q66PY1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Scube3Q66PY1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scube3Q66PY1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.12■□□□□ 0.49
Scube3Q66PY1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scube3Q66PY1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scube3Q66PY1 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.12■□□□□ 0.49
Scube3Q66PY1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms