Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.42□□□□□ -0.1
Col7a1Q63870 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.42□□□□□ -0.1
Col7a1Q63870 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col7a1Q63870 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col7a1Q63870 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col7a1Q63870 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Col7a1Q63870 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Col7a1Q63870 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col7a1Q63870 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col7a1Q63870 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.41□□□□□ -0.1
Col7a1Q63870 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col7a1Q63870 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col7a1Q63870 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.41□□□□□ -0.1
Col7a1Q63870 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col7a1Q63870 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col7a1Q63870 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.41□□□□□ -0.1
Col7a1Q63870 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col7a1Q63870 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col7a1Q63870 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col7a1Q63870 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.4□□□□□ -0.1
Col7a1Q63870 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Col7a1Q63870 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.4□□□□□ -0.1
Col7a1Q63870 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col7a1Q63870 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col7a1Q63870 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col7a1Q63870 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col7a1Q63870 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col7a1Q63870 Gm11336-201ENSMUST00000118168 334 ntBASIC14.4□□□□□ -0.1
Col7a1Q63870 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.4□□□□□ -0.1
Col7a1Q63870 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col7a1Q63870 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col7a1Q63870 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col7a1Q63870 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.4□□□□□ -0.1
Col7a1Q63870 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col7a1Q63870 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col7a1Q63870 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Col7a1Q63870 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col7a1Q63870 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col7a1Q63870 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.39□□□□□ -0.11
Col7a1Q63870 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col7a1Q63870 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col7a1Q63870 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.39□□□□□ -0.11
Col7a1Q63870 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col7a1Q63870 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col7a1Q63870 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col7a1Q63870 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col7a1Q63870 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col7a1Q63870 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col7a1Q63870 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col7a1Q63870 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col7a1Q63870 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col7a1Q63870 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col7a1Q63870 Gm13616-201ENSMUST00000120600 222 ntBASIC14.38□□□□□ -0.11
Col7a1Q63870 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.38□□□□□ -0.11
Col7a1Q63870 Gm27628-201ENSMUST00000184911 107 ntBASIC14.38□□□□□ -0.11
Col7a1Q63870 Gm44872-201ENSMUST00000207864 420 ntBASIC14.38□□□□□ -0.11
Col7a1Q63870 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.38□□□□□ -0.11
Col7a1Q63870 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.38□□□□□ -0.11
Col7a1Q63870 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col7a1Q63870 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Col7a1Q63870 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col7a1Q63870 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col7a1Q63870 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Col7a1Q63870 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col7a1Q63870 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Col7a1Q63870 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Col7a1Q63870 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.38□□□□□ -0.11
Col7a1Q63870 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col7a1Q63870 Gm6089-201ENSMUST00000197666 938 ntBASIC14.38□□□□□ -0.11
Col7a1Q63870 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
Col7a1Q63870 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col7a1Q63870 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col7a1Q63870 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col7a1Q63870 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.38□□□□□ -0.11
Col7a1Q63870 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Col7a1Q63870 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col7a1Q63870 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.38□□□□□ -0.11
Col7a1Q63870 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col7a1Q63870 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col7a1Q63870 Gm13036-201ENSMUST00000117799 748 ntBASIC14.37□□□□□ -0.11
Col7a1Q63870 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.37□□□□□ -0.11
Col7a1Q63870 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col7a1Q63870 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.37□□□□□ -0.11
Col7a1Q63870 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col7a1Q63870 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col7a1Q63870 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col7a1Q63870 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Col7a1Q63870 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col7a1Q63870 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col7a1Q63870 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Col7a1Q63870 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col7a1Q63870 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col7a1Q63870 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Col7a1Q63870 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.37□□□□□ -0.11
Col7a1Q63870 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.37□□□□□ -0.11
Col7a1Q63870 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.37□□□□□ -0.11
Col7a1Q63870 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col7a1Q63870 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col7a1Q63870 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Col7a1Q63870 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms