Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Iqck-206ENSMUST00000208658 2891 ntBASIC16.39■□□□□ 0.22
AtmQ62388 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.39■□□□□ 0.22
AtmQ62388 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AtmQ62388 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AtmQ62388 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AtmQ62388 Gm12895-201ENSMUST00000122214 226 ntBASIC16.39■□□□□ 0.21
AtmQ62388 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
AtmQ62388 Mir5126-201ENSMUST00000175513 77 ntBASIC16.39■□□□□ 0.21
AtmQ62388 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AtmQ62388 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.39■□□□□ 0.21
AtmQ62388 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AtmQ62388 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AtmQ62388 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AtmQ62388 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.39■□□□□ 0.21
AtmQ62388 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
AtmQ62388 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AtmQ62388 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AtmQ62388 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AtmQ62388 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AtmQ62388 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AtmQ62388 Gm14057-201ENSMUST00000120631 482 ntBASIC16.39■□□□□ 0.21
AtmQ62388 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.39■□□□□ 0.21
AtmQ62388 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
AtmQ62388 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AtmQ62388 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.39■□□□□ 0.21
AtmQ62388 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.39■□□□□ 0.21
AtmQ62388 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.38■□□□□ 0.21
AtmQ62388 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AtmQ62388 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AtmQ62388 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AtmQ62388 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AtmQ62388 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AtmQ62388 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
AtmQ62388 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
AtmQ62388 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
AtmQ62388 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AtmQ62388 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
AtmQ62388 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
AtmQ62388 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AtmQ62388 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AtmQ62388 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
AtmQ62388 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.37■□□□□ 0.21
AtmQ62388 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AtmQ62388 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AtmQ62388 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AtmQ62388 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AtmQ62388 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AtmQ62388 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AtmQ62388 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
AtmQ62388 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AtmQ62388 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AtmQ62388 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.37■□□□□ 0.21
AtmQ62388 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AtmQ62388 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AtmQ62388 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AtmQ62388 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.37■□□□□ 0.21
AtmQ62388 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.37■□□□□ 0.21
AtmQ62388 Gm14822-201ENSMUST00000122247 291 ntBASIC16.37■□□□□ 0.21
AtmQ62388 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AtmQ62388 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AtmQ62388 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AtmQ62388 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
AtmQ62388 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AtmQ62388 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AtmQ62388 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AtmQ62388 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.36■□□□□ 0.21
AtmQ62388 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
AtmQ62388 Gm15467-201ENSMUST00000120582 445 ntBASIC16.36■□□□□ 0.21
AtmQ62388 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
AtmQ62388 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AtmQ62388 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AtmQ62388 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.35■□□□□ 0.21
AtmQ62388 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
AtmQ62388 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
AtmQ62388 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.35■□□□□ 0.21
AtmQ62388 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AtmQ62388 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AtmQ62388 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AtmQ62388 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.35■□□□□ 0.21
AtmQ62388 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.35■□□□□ 0.21
AtmQ62388 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AtmQ62388 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AtmQ62388 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.35■□□□□ 0.21
AtmQ62388 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AtmQ62388 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.35■□□□□ 0.21
AtmQ62388 Gm8097-201ENSMUST00000117903 829 ntBASIC16.34■□□□□ 0.21
AtmQ62388 Gm11779-201ENSMUST00000118541 368 ntBASIC16.34■□□□□ 0.21
AtmQ62388 Mir5131-201ENSMUST00000175426 93 ntBASIC16.34■□□□□ 0.21
AtmQ62388 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
AtmQ62388 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
AtmQ62388 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.34■□□□□ 0.21
AtmQ62388 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AtmQ62388 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AtmQ62388 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.34■□□□□ 0.21
AtmQ62388 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AtmQ62388 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.34■□□□□ 0.21
AtmQ62388 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AtmQ62388 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AtmQ62388 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AtmQ62388 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms