Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Gm5075-201ENSMUST00000196916 622 ntBASIC12.81□□□□□ -0.36
Ss18Q62280 Gm8969-201ENSMUST00000199694 526 ntBASIC12.81□□□□□ -0.36
Ss18Q62280 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ss18Q62280 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ss18Q62280 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ss18Q62280 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.81□□□□□ -0.36
Ss18Q62280 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.81□□□□□ -0.36
Ss18Q62280 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ss18Q62280 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ss18Q62280 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ss18Q62280 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ss18Q62280 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ss18Q62280 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ss18Q62280 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ss18Q62280 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ss18Q62280 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ss18Q62280 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.8□□□□□ -0.36
Ss18Q62280 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ss18Q62280 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ss18Q62280 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ss18Q62280 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ss18Q62280 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ss18Q62280 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ss18Q62280 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.8□□□□□ -0.36
Ss18Q62280 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ss18Q62280 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.8□□□□□ -0.36
Ss18Q62280 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ss18Q62280 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.8□□□□□ -0.36
Ss18Q62280 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ss18Q62280 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ss18Q62280 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ss18Q62280 Gm26571-201ENSMUST00000181399 666 ntBASIC12.8□□□□□ -0.36
Ss18Q62280 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ss18Q62280 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ss18Q62280 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ss18Q62280 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ss18Q62280 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.8□□□□□ -0.36
Ss18Q62280 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ss18Q62280 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ss18Q62280 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ss18Q62280 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ss18Q62280 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ss18Q62280 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ss18Q62280 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ss18Q62280 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ss18Q62280 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.79□□□□□ -0.36
Ss18Q62280 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ss18Q62280 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ss18Q62280 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Ss18Q62280 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Ss18Q62280 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.79□□□□□ -0.36
Ss18Q62280 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.79□□□□□ -0.36
Ss18Q62280 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ss18Q62280 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ss18Q62280 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ss18Q62280 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ss18Q62280 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ss18Q62280 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ss18Q62280 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ss18Q62280 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ss18Q62280 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ss18Q62280 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ss18Q62280 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ss18Q62280 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ss18Q62280 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.78□□□□□ -0.36
Ss18Q62280 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ss18Q62280 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ss18Q62280 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ss18Q62280 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ss18Q62280 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ss18Q62280 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ss18Q62280 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ss18Q62280 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.78□□□□□ -0.36
Ss18Q62280 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ss18Q62280 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.78□□□□□ -0.36
Ss18Q62280 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ss18Q62280 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.78□□□□□ -0.36
Ss18Q62280 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ss18Q62280 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.78□□□□□ -0.36
Ss18Q62280 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ss18Q62280 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ss18Q62280 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ss18Q62280 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ss18Q62280 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ss18Q62280 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Ss18Q62280 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ss18Q62280 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ss18Q62280 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ss18Q62280 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ss18Q62280 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ss18Q62280 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ss18Q62280 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Ss18Q62280 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ss18Q62280 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ss18Q62280 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ss18Q62280 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ss18Q62280 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ss18Q62280 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ss18Q62280 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.77□□□□□ -0.36
Ss18Q62280 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms