Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six3Q62233 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Six3Q62233 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six3Q62233 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six3Q62233 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Six3Q62233 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six3Q62233 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six3Q62233 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six3Q62233 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Six3Q62233 Gm11643-201ENSMUST00000119578 864 ntBASIC16.94■□□□□ 0.3
Six3Q62233 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Six3Q62233 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Six3Q62233 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.94■□□□□ 0.3
Six3Q62233 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Six3Q62233 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six3Q62233 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six3Q62233 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six3Q62233 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six3Q62233 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.94■□□□□ 0.3
Six3Q62233 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Six3Q62233 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six3Q62233 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Six3Q62233 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six3Q62233 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six3Q62233 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.94■□□□□ 0.3
Six3Q62233 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six3Q62233 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six3Q62233 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.94■□□□□ 0.3
Six3Q62233 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.93■□□□□ 0.3
Six3Q62233 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six3Q62233 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six3Q62233 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six3Q62233 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Six3Q62233 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six3Q62233 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six3Q62233 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Six3Q62233 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.93■□□□□ 0.3
Six3Q62233 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.93■□□□□ 0.3
Six3Q62233 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six3Q62233 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Six3Q62233 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Six3Q62233 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six3Q62233 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Six3Q62233 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six3Q62233 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six3Q62233 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Six3Q62233 Gm6576-201ENSMUST00000169678 883 ntBASIC16.92■□□□□ 0.3
Six3Q62233 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Six3Q62233 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Six3Q62233 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six3Q62233 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Six3Q62233 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six3Q62233 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six3Q62233 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Six3Q62233 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six3Q62233 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six3Q62233 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six3Q62233 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six3Q62233 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six3Q62233 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six3Q62233 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Six3Q62233 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six3Q62233 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six3Q62233 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.91■□□□□ 0.3
Six3Q62233 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.91■□□□□ 0.3
Six3Q62233 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six3Q62233 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.91■□□□□ 0.3
Six3Q62233 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six3Q62233 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six3Q62233 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six3Q62233 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six3Q62233 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six3Q62233 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Six3Q62233 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six3Q62233 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Six3Q62233 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six3Q62233 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six3Q62233 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six3Q62233 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six3Q62233 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six3Q62233 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six3Q62233 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Six3Q62233 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Six3Q62233 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six3Q62233 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six3Q62233 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six3Q62233 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
Six3Q62233 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Six3Q62233 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.89■□□□□ 0.29
Six3Q62233 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six3Q62233 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six3Q62233 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Six3Q62233 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.89■□□□□ 0.29
Six3Q62233 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six3Q62233 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Six3Q62233 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.89■□□□□ 0.29
Six3Q62233 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Six3Q62233 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Six3Q62233 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Six3Q62233 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms