Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sdf4Q61112 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sdf4Q61112 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sdf4Q61112 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sdf4Q61112 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Sdf4Q61112 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.58■□□□□ 0.4
Sdf4Q61112 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdf4Q61112 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdf4Q61112 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdf4Q61112 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdf4Q61112 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdf4Q61112 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdf4Q61112 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.57■□□□□ 0.4
Sdf4Q61112 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sdf4Q61112 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.57■□□□□ 0.4
Sdf4Q61112 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.57■□□□□ 0.4
Sdf4Q61112 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.57■□□□□ 0.4
Sdf4Q61112 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Sdf4Q61112 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdf4Q61112 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Sdf4Q61112 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdf4Q61112 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Sdf4Q61112 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdf4Q61112 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sdf4Q61112 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sdf4Q61112 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdf4Q61112 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sdf4Q61112 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.56■□□□□ 0.4
Sdf4Q61112 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdf4Q61112 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Sdf4Q61112 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdf4Q61112 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sdf4Q61112 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdf4Q61112 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.55■□□□□ 0.4
Sdf4Q61112 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sdf4Q61112 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdf4Q61112 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdf4Q61112 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdf4Q61112 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdf4Q61112 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdf4Q61112 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdf4Q61112 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdf4Q61112 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdf4Q61112 Mir1199-201ENSMUST00000117015 119 ntBASIC17.55■□□□□ 0.4
Sdf4Q61112 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sdf4Q61112 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sdf4Q61112 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.55■□□□□ 0.4
Sdf4Q61112 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sdf4Q61112 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sdf4Q61112 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sdf4Q61112 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.55■□□□□ 0.4
Sdf4Q61112 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdf4Q61112 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdf4Q61112 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdf4Q61112 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.55■□□□□ 0.4
Sdf4Q61112 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdf4Q61112 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sdf4Q61112 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdf4Q61112 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdf4Q61112 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sdf4Q61112 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdf4Q61112 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.54■□□□□ 0.4
Sdf4Q61112 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.54■□□□□ 0.4
Sdf4Q61112 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.54■□□□□ 0.4
Sdf4Q61112 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sdf4Q61112 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.54■□□□□ 0.4
Sdf4Q61112 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.54■□□□□ 0.4
Sdf4Q61112 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.54■□□□□ 0.4
Sdf4Q61112 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdf4Q61112 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdf4Q61112 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdf4Q61112 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.54■□□□□ 0.4
Sdf4Q61112 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdf4Q61112 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sdf4Q61112 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdf4Q61112 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Sdf4Q61112 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdf4Q61112 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdf4Q61112 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdf4Q61112 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdf4Q61112 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdf4Q61112 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sdf4Q61112 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdf4Q61112 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Sdf4Q61112 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Sdf4Q61112 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Sdf4Q61112 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdf4Q61112 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sdf4Q61112 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.53■□□□□ 0.4
Sdf4Q61112 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.53■□□□□ 0.4
Sdf4Q61112 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.53■□□□□ 0.4
Sdf4Q61112 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.53■□□□□ 0.4
Sdf4Q61112 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.53■□□□□ 0.4
Sdf4Q61112 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.53■□□□□ 0.4
Sdf4Q61112 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdf4Q61112 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdf4Q61112 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sdf4Q61112 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sdf4Q61112 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdf4Q61112 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms