Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Shroom1Q5SX79 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Shroom1Q5SX79 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.39■□□□□ 0.54
Shroom1Q5SX79 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Shroom1Q5SX79 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom1Q5SX79 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom1Q5SX79 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom1Q5SX79 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom1Q5SX79 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.39■□□□□ 0.53
Shroom1Q5SX79 AA414768-201ENSMUST00000121924 1257 ntBASIC18.39■□□□□ 0.53
Shroom1Q5SX79 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom1Q5SX79 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.39■□□□□ 0.53
Shroom1Q5SX79 Gm18101-201ENSMUST00000215769 548 ntBASIC18.39■□□□□ 0.53
Shroom1Q5SX79 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.39■□□□□ 0.53
Shroom1Q5SX79 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom1Q5SX79 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom1Q5SX79 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom1Q5SX79 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom1Q5SX79 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom1Q5SX79 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom1Q5SX79 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Shroom1Q5SX79 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom1Q5SX79 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.38■□□□□ 0.53
Shroom1Q5SX79 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom1Q5SX79 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Shroom1Q5SX79 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom1Q5SX79 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom1Q5SX79 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom1Q5SX79 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom1Q5SX79 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom1Q5SX79 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom1Q5SX79 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.38■□□□□ 0.53
Shroom1Q5SX79 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Shroom1Q5SX79 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom1Q5SX79 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom1Q5SX79 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Shroom1Q5SX79 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom1Q5SX79 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom1Q5SX79 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Shroom1Q5SX79 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom1Q5SX79 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.38■□□□□ 0.53
Shroom1Q5SX79 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom1Q5SX79 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Shroom1Q5SX79 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shroom1Q5SX79 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shroom1Q5SX79 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shroom1Q5SX79 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shroom1Q5SX79 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shroom1Q5SX79 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shroom1Q5SX79 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shroom1Q5SX79 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shroom1Q5SX79 Gm7638-201ENSMUST00000121348 967 ntBASIC18.37■□□□□ 0.53
Shroom1Q5SX79 Gm13474-201ENSMUST00000122466 815 ntBASIC18.37■□□□□ 0.53
Shroom1Q5SX79 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Shroom1Q5SX79 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shroom1Q5SX79 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shroom1Q5SX79 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shroom1Q5SX79 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shroom1Q5SX79 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Shroom1Q5SX79 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shroom1Q5SX79 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shroom1Q5SX79 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
Shroom1Q5SX79 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Gm6345-202ENSMUST00000180900 204 ntBASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom1Q5SX79 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shroom1Q5SX79 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shroom1Q5SX79 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Shroom1Q5SX79 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shroom1Q5SX79 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shroom1Q5SX79 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shroom1Q5SX79 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Shroom1Q5SX79 Gm22697-201ENSMUST00000175194 63 ntBASIC18.35■□□□□ 0.53
Shroom1Q5SX79 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.35■□□□□ 0.53
Shroom1Q5SX79 Gm7791-201ENSMUST00000219066 539 ntBASIC18.35■□□□□ 0.53
Shroom1Q5SX79 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shroom1Q5SX79 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Shroom1Q5SX79 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms