Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-1Q5R1I8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-1Q5R1I8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Gm45906-201ENSMUST00000208911 1430 ntBASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Nkain2-201ENSMUST00000092602 558 ntBASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Gm12818-201ENSMUST00000117562 1349 ntBASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav3-1Q5R1I8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav3-1Q5R1I8 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms