Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 Gm27741-201ENSMUST00000185060 237 ntBASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.23■□□□□ 0.03
Trav6-2Q5R1I4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Gm26039-201ENSMUST00000158152 144 ntBASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-2Q5R1I4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav6-2Q5R1I4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav6-2Q5R1I4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-2Q5R1I4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-2Q5R1I4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
Trav6-2Q5R1I4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-2Q5R1I4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-2Q5R1I4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-2Q5R1I4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-2Q5R1I4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.21■□□□□ 0.03
Trav6-2Q5R1I4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.21■□□□□ 0.03
Trav6-2Q5R1I4 Gm18958-201ENSMUST00000174258 762 ntBASIC15.21■□□□□ 0.03
Trav6-2Q5R1I4 Gm29518-201ENSMUST00000190858 372 ntBASIC15.21■□□□□ 0.03
Trav6-2Q5R1I4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-2Q5R1I4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav6-2Q5R1I4 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.21■□□□□ 0.03
Trav6-2Q5R1I4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-2Q5R1I4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-2Q5R1I4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Trav6-2Q5R1I4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-2Q5R1I4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trav6-2Q5R1I4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav6-2Q5R1I4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav6-2Q5R1I4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trav6-2Q5R1I4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-2Q5R1I4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-2Q5R1I4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Trav6-2Q5R1I4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav6-2Q5R1I4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-2Q5R1I4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-2Q5R1I4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trav6-2Q5R1I4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-2Q5R1I4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.2■□□□□ 0.02
Trav6-2Q5R1I4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-2Q5R1I4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav6-2Q5R1I4 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.2■□□□□ 0.02
Trav6-2Q5R1I4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav6-2Q5R1I4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
Trav6-2Q5R1I4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav6-2Q5R1I4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-2Q5R1I4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-2Q5R1I4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-2Q5R1I4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav6-2Q5R1I4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav6-2Q5R1I4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms