Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Gm27405-201ENSMUST00000184201 112 ntBASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Gm26524-201ENSMUST00000192339 390 ntBASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-3Q5R1I1 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Gm12933-201ENSMUST00000120203 872 ntBASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-3Q5R1I1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-3Q5R1I1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-3Q5R1I1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-3Q5R1I1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-3Q5R1I1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms