Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Gm13234-201ENSMUST00000120010 747 ntBASIC13.51□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Gm10418-201ENSMUST00000100943 576 ntBASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Gm29791-202ENSMUST00000207888 369 ntBASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Gm13216-201ENSMUST00000117145 591 ntBASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms