Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Trim41Q5NCC3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Trim41Q5NCC3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Trim41Q5NCC3 Birc2-201ENSMUST00000054878 378 ntBASIC30.03■■■□□ 2.4
Trim41Q5NCC3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
Trim41Q5NCC3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Trim41Q5NCC3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Trim41Q5NCC3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Trim41Q5NCC3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC30.02■■■□□ 2.4
Trim41Q5NCC3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Trim41Q5NCC3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Trim41Q5NCC3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC30.02■■■□□ 2.4
Trim41Q5NCC3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Trim41Q5NCC3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC30.02■■■□□ 2.4
Trim41Q5NCC3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Trim41Q5NCC3 Gm27357-201ENSMUST00000183754 135 ntBASIC30.02■■■□□ 2.4
Trim41Q5NCC3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC30.02■■■□□ 2.4
Trim41Q5NCC3 AC159093.1-201ENSMUST00000227779 380 ntBASIC30.02■■■□□ 2.4
Trim41Q5NCC3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
Trim41Q5NCC3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Trim41Q5NCC3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Trim41Q5NCC3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC30.01■■■□□ 2.4
Trim41Q5NCC3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.4
Trim41Q5NCC3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
Trim41Q5NCC3 Gm6623-201ENSMUST00000173570 544 ntBASIC30.01■■■□□ 2.39
Trim41Q5NCC3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Trim41Q5NCC3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Trim41Q5NCC3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Trim41Q5NCC3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Trim41Q5NCC3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC30■■■□□ 2.39
Trim41Q5NCC3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
Trim41Q5NCC3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Trim41Q5NCC3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Trim41Q5NCC3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
Trim41Q5NCC3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC30■■■□□ 2.39
Trim41Q5NCC3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC30■■■□□ 2.39
Trim41Q5NCC3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC29.99■■■□□ 2.39
Trim41Q5NCC3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Trim41Q5NCC3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Trim41Q5NCC3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Trim41Q5NCC3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
Trim41Q5NCC3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Trim41Q5NCC3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Trim41Q5NCC3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC29.99■■■□□ 2.39
Trim41Q5NCC3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC29.99■■■□□ 2.39
Trim41Q5NCC3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Trim41Q5NCC3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Trim41Q5NCC3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Trim41Q5NCC3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC29.98■■■□□ 2.39
Trim41Q5NCC3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Trim41Q5NCC3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Trim41Q5NCC3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Trim41Q5NCC3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Trim41Q5NCC3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Trim41Q5NCC3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC29.98■■■□□ 2.39
Trim41Q5NCC3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Trim41Q5NCC3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
Trim41Q5NCC3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Trim41Q5NCC3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Trim41Q5NCC3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
Trim41Q5NCC3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Trim41Q5NCC3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Trim41Q5NCC3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Trim41Q5NCC3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC29.97■■■□□ 2.39
Trim41Q5NCC3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
Trim41Q5NCC3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Trim41Q5NCC3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
Trim41Q5NCC3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Trim41Q5NCC3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Trim41Q5NCC3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC29.97■■■□□ 2.39
Trim41Q5NCC3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Trim41Q5NCC3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Trim41Q5NCC3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Trim41Q5NCC3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
Trim41Q5NCC3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Trim41Q5NCC3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Trim41Q5NCC3 Gm19721-201ENSMUST00000195284 1764 ntBASIC29.96■■■□□ 2.39
Trim41Q5NCC3 Gm11355-201ENSMUST00000121120 306 ntBASIC29.96■■■□□ 2.39
Trim41Q5NCC3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Trim41Q5NCC3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Trim41Q5NCC3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Trim41Q5NCC3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC29.96■■■□□ 2.39
Trim41Q5NCC3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Trim41Q5NCC3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
Trim41Q5NCC3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Trim41Q5NCC3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Trim41Q5NCC3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.39
Trim41Q5NCC3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
Trim41Q5NCC3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC29.95■■■□□ 2.39
Trim41Q5NCC3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Trim41Q5NCC3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Trim41Q5NCC3 Gm26039-201ENSMUST00000158152 144 ntBASIC29.95■■■□□ 2.39
Trim41Q5NCC3 Gm3272-201ENSMUST00000181181 1229 ntBASIC29.95■■■□□ 2.39
Trim41Q5NCC3 Gm2213-201ENSMUST00000197485 688 ntBASIC29.95■■■□□ 2.39
Trim41Q5NCC3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Trim41Q5NCC3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC29.95■■■□□ 2.39
Trim41Q5NCC3 Gm10566-201ENSMUST00000086739 996 ntBASIC29.95■■■□□ 2.39
Trim41Q5NCC3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Trim41Q5NCC3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
Trim41Q5NCC3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms