Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vps13aQ5H8C4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.21■□□□□ 0.35
Vps13aQ5H8C4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vps13aQ5H8C4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps13aQ5H8C4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.21■□□□□ 0.35
Vps13aQ5H8C4 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.21■□□□□ 0.35
Vps13aQ5H8C4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vps13aQ5H8C4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Vps13aQ5H8C4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps13aQ5H8C4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps13aQ5H8C4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps13aQ5H8C4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Vps13aQ5H8C4 Gm8097-201ENSMUST00000117903 829 ntBASIC17.21■□□□□ 0.35
Vps13aQ5H8C4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.21■□□□□ 0.35
Vps13aQ5H8C4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps13aQ5H8C4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps13aQ5H8C4 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Vps13aQ5H8C4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Vps13aQ5H8C4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Vps13aQ5H8C4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Vps13aQ5H8C4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.2■□□□□ 0.34
Vps13aQ5H8C4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.2■□□□□ 0.34
Vps13aQ5H8C4 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps13aQ5H8C4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps13aQ5H8C4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Vps13aQ5H8C4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vps13aQ5H8C4 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.2■□□□□ 0.34
Vps13aQ5H8C4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.2■□□□□ 0.34
Vps13aQ5H8C4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.2■□□□□ 0.34
Vps13aQ5H8C4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.2■□□□□ 0.34
Vps13aQ5H8C4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps13aQ5H8C4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps13aQ5H8C4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Vps13aQ5H8C4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.2■□□□□ 0.34
Vps13aQ5H8C4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps13aQ5H8C4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vps13aQ5H8C4 Gm15372-201ENSMUST00000120729 834 ntBASIC17.2■□□□□ 0.34
Vps13aQ5H8C4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.2■□□□□ 0.34
Vps13aQ5H8C4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps13aQ5H8C4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps13aQ5H8C4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps13aQ5H8C4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps13aQ5H8C4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vps13aQ5H8C4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Vps13aQ5H8C4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps13aQ5H8C4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps13aQ5H8C4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps13aQ5H8C4 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.19■□□□□ 0.34
Vps13aQ5H8C4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.19■□□□□ 0.34
Vps13aQ5H8C4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps13aQ5H8C4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps13aQ5H8C4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps13aQ5H8C4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.18■□□□□ 0.34
Vps13aQ5H8C4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps13aQ5H8C4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps13aQ5H8C4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps13aQ5H8C4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps13aQ5H8C4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps13aQ5H8C4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps13aQ5H8C4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps13aQ5H8C4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.18■□□□□ 0.34
Vps13aQ5H8C4 Gm12644-201ENSMUST00000119935 606 ntBASIC17.18■□□□□ 0.34
Vps13aQ5H8C4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps13aQ5H8C4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.18■□□□□ 0.34
Vps13aQ5H8C4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps13aQ5H8C4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Vps13aQ5H8C4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.18■□□□□ 0.34
Vps13aQ5H8C4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Vps13aQ5H8C4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps13aQ5H8C4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps13aQ5H8C4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps13aQ5H8C4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps13aQ5H8C4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps13aQ5H8C4 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps13aQ5H8C4 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps13aQ5H8C4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Vps13aQ5H8C4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps13aQ5H8C4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps13aQ5H8C4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
Vps13aQ5H8C4 Tgds-204ENSMUST00000228543 1594 ntBASIC17.17■□□□□ 0.34
Vps13aQ5H8C4 Gm2213-201ENSMUST00000197485 688 ntBASIC17.17■□□□□ 0.34
Vps13aQ5H8C4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps13aQ5H8C4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps13aQ5H8C4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps13aQ5H8C4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps13aQ5H8C4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps13aQ5H8C4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps13aQ5H8C4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Vps13aQ5H8C4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps13aQ5H8C4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.16■□□□□ 0.34
Vps13aQ5H8C4 Gm6376-201ENSMUST00000209407 580 ntBASIC17.16■□□□□ 0.34
Vps13aQ5H8C4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps13aQ5H8C4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Vps13aQ5H8C4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms