Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf20Q5DTM8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Rnf20Q5DTM8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf20Q5DTM8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Rnf20Q5DTM8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf20Q5DTM8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf20Q5DTM8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf20Q5DTM8 Gm10517-202ENSMUST00000192970 758 ntBASIC20.62■□□□□ 0.89
Rnf20Q5DTM8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Rnf20Q5DTM8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf20Q5DTM8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Rnf20Q5DTM8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf20Q5DTM8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf20Q5DTM8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf20Q5DTM8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf20Q5DTM8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf20Q5DTM8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf20Q5DTM8 Gm10698-201ENSMUST00000182663 604 ntBASIC20.61■□□□□ 0.89
Rnf20Q5DTM8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf20Q5DTM8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf20Q5DTM8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf20Q5DTM8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf20Q5DTM8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf20Q5DTM8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf20Q5DTM8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Rnf20Q5DTM8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf20Q5DTM8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.6■□□□□ 0.89
Rnf20Q5DTM8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf20Q5DTM8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf20Q5DTM8 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.6■□□□□ 0.89
Rnf20Q5DTM8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.6■□□□□ 0.89
Rnf20Q5DTM8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.6■□□□□ 0.89
Rnf20Q5DTM8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Rnf20Q5DTM8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Rnf20Q5DTM8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.6■□□□□ 0.89
Rnf20Q5DTM8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rnf20Q5DTM8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.6■□□□□ 0.89
Rnf20Q5DTM8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rnf20Q5DTM8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Rnf20Q5DTM8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf20Q5DTM8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf20Q5DTM8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rnf20Q5DTM8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf20Q5DTM8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf20Q5DTM8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf20Q5DTM8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf20Q5DTM8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf20Q5DTM8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf20Q5DTM8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf20Q5DTM8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf20Q5DTM8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf20Q5DTM8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf20Q5DTM8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.58■□□□□ 0.89
Rnf20Q5DTM8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf20Q5DTM8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf20Q5DTM8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf20Q5DTM8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf20Q5DTM8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.58■□□□□ 0.89
Rnf20Q5DTM8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Rnf20Q5DTM8 Gm13168-201ENSMUST00000121771 632 ntBASIC20.58■□□□□ 0.89
Rnf20Q5DTM8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf20Q5DTM8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf20Q5DTM8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf20Q5DTM8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf20Q5DTM8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rnf20Q5DTM8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rnf20Q5DTM8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rnf20Q5DTM8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rnf20Q5DTM8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rnf20Q5DTM8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf20Q5DTM8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf20Q5DTM8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Rnf20Q5DTM8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf20Q5DTM8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf20Q5DTM8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf20Q5DTM8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.57■□□□□ 0.88
Rnf20Q5DTM8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf20Q5DTM8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf20Q5DTM8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rnf20Q5DTM8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf20Q5DTM8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf20Q5DTM8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf20Q5DTM8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf20Q5DTM8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf20Q5DTM8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf20Q5DTM8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf20Q5DTM8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf20Q5DTM8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf20Q5DTM8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf20Q5DTM8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf20Q5DTM8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf20Q5DTM8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf20Q5DTM8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf20Q5DTM8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Rnf20Q5DTM8 Gm8520-201ENSMUST00000186517 868 ntBASIC20.56■□□□□ 0.88
Rnf20Q5DTM8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf20Q5DTM8 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.56■□□□□ 0.88
Rnf20Q5DTM8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf20Q5DTM8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.56■□□□□ 0.88
Rnf20Q5DTM8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms