Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
Pds5bQ4VA53 AC151286.1-201ENSMUST00000198489 145 ntBASIC30.27■■■□□ 2.44
Pds5bQ4VA53 CT009713.7-201ENSMUST00000224689 571 ntBASIC30.27■■■□□ 2.44
Pds5bQ4VA53 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Pds5bQ4VA53 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Pds5bQ4VA53 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Pds5bQ4VA53 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Pds5bQ4VA53 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Pds5bQ4VA53 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Pds5bQ4VA53 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Pds5bQ4VA53 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Pds5bQ4VA53 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Pds5bQ4VA53 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Pds5bQ4VA53 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Pds5bQ4VA53 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC30.26■■■□□ 2.43
Pds5bQ4VA53 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
Pds5bQ4VA53 Gm44450-201ENSMUST00000199528 114 ntBASIC30.26■■■□□ 2.43
Pds5bQ4VA53 AC158982.1-201ENSMUST00000228377 901 ntBASIC30.26■■■□□ 2.43
Pds5bQ4VA53 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Pds5bQ4VA53 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Pds5bQ4VA53 Gm19721-201ENSMUST00000195284 1764 ntBASIC30.26■■■□□ 2.43
Pds5bQ4VA53 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Pds5bQ4VA53 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Pds5bQ4VA53 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Pds5bQ4VA53 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC30.25■■■□□ 2.43
Pds5bQ4VA53 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC30.25■■■□□ 2.43
Pds5bQ4VA53 Rbfox2-207ENSMUST00000227533 1041 ntBASIC30.25■■■□□ 2.43
Pds5bQ4VA53 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC30.25■■■□□ 2.43
Pds5bQ4VA53 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC30.25■■■□□ 2.43
Pds5bQ4VA53 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC30.24■■■□□ 2.43
Pds5bQ4VA53 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Pds5bQ4VA53 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
Pds5bQ4VA53 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC30.24■■■□□ 2.43
Pds5bQ4VA53 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC30.24■■■□□ 2.43
Pds5bQ4VA53 Gm29707-201ENSMUST00000196325 491 ntBASIC30.24■■■□□ 2.43
Pds5bQ4VA53 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Pds5bQ4VA53 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
Pds5bQ4VA53 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Pds5bQ4VA53 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
Pds5bQ4VA53 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
Pds5bQ4VA53 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Pds5bQ4VA53 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Pds5bQ4VA53 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Pds5bQ4VA53 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
Pds5bQ4VA53 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
Pds5bQ4VA53 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
Pds5bQ4VA53 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Pds5bQ4VA53 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC30.23■■■□□ 2.43
Pds5bQ4VA53 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC30.23■■■□□ 2.43
Pds5bQ4VA53 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pds5bQ4VA53 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
Pds5bQ4VA53 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Pds5bQ4VA53 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pds5bQ4VA53 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
Pds5bQ4VA53 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pds5bQ4VA53 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pds5bQ4VA53 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pds5bQ4VA53 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pds5bQ4VA53 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Pds5bQ4VA53 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC30.22■■■□□ 2.43
Pds5bQ4VA53 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pds5bQ4VA53 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pds5bQ4VA53 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pds5bQ4VA53 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pds5bQ4VA53 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pds5bQ4VA53 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC30.22■■■□□ 2.43
Pds5bQ4VA53 Gm8097-201ENSMUST00000117903 829 ntBASIC30.22■■■□□ 2.43
Pds5bQ4VA53 AV026068-213ENSMUST00000223675 1171 ntBASIC30.22■■■□□ 2.43
Pds5bQ4VA53 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
Pds5bQ4VA53 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Pds5bQ4VA53 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Pds5bQ4VA53 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Pds5bQ4VA53 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Pds5bQ4VA53 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Pds5bQ4VA53 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC30.21■■■□□ 2.43
Pds5bQ4VA53 Gm13418-201ENSMUST00000119097 944 ntBASIC30.21■■■□□ 2.43
Pds5bQ4VA53 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC30.21■■■□□ 2.43
Pds5bQ4VA53 Gm4535-201ENSMUST00000182274 558 ntBASIC30.21■■■□□ 2.43
Pds5bQ4VA53 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Pds5bQ4VA53 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC30.21■■■□□ 2.43
Pds5bQ4VA53 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Pds5bQ4VA53 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
Pds5bQ4VA53 Gm15590-201ENSMUST00000078419 552 ntBASIC30.21■■■□□ 2.43
Pds5bQ4VA53 Gm10355-201ENSMUST00000097146 517 ntBASIC30.21■■■□□ 2.43
Pds5bQ4VA53 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Pds5bQ4VA53 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.43
Pds5bQ4VA53 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Pds5bQ4VA53 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Pds5bQ4VA53 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
Pds5bQ4VA53 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.42
Pds5bQ4VA53 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC30.2■■■□□ 2.42
Pds5bQ4VA53 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Pds5bQ4VA53 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Pds5bQ4VA53 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Pds5bQ4VA53 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Pds5bQ4VA53 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Pds5bQ4VA53 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC30.19■■■□□ 2.42
Pds5bQ4VA53 Gm15173-201ENSMUST00000122049 433 ntBASIC30.19■■■□□ 2.42
Pds5bQ4VA53 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Pds5bQ4VA53 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms