Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin28bQ45KJ6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
Lin28bQ45KJ6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lin28bQ45KJ6 Gm16061-201ENSMUST00000122167 857 ntBASIC16.47■□□□□ 0.23
Lin28bQ45KJ6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Lin28bQ45KJ6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin28bQ45KJ6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin28bQ45KJ6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.47■□□□□ 0.23
Lin28bQ45KJ6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.47■□□□□ 0.23
Lin28bQ45KJ6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin28bQ45KJ6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Lin28bQ45KJ6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin28bQ45KJ6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin28bQ45KJ6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Lin28bQ45KJ6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin28bQ45KJ6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Lin28bQ45KJ6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin28bQ45KJ6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Lin28bQ45KJ6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.46■□□□□ 0.23
Lin28bQ45KJ6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lin28bQ45KJ6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lin28bQ45KJ6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lin28bQ45KJ6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lin28bQ45KJ6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.46■□□□□ 0.23
Lin28bQ45KJ6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.46■□□□□ 0.23
Lin28bQ45KJ6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Lin28bQ45KJ6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lin28bQ45KJ6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lin28bQ45KJ6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lin28bQ45KJ6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Lin28bQ45KJ6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Lin28bQ45KJ6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Lin28bQ45KJ6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lin28bQ45KJ6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lin28bQ45KJ6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lin28bQ45KJ6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.45■□□□□ 0.22
Lin28bQ45KJ6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lin28bQ45KJ6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lin28bQ45KJ6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.45■□□□□ 0.22
Lin28bQ45KJ6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lin28bQ45KJ6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.45■□□□□ 0.22
Lin28bQ45KJ6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Lin28bQ45KJ6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lin28bQ45KJ6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.45■□□□□ 0.22
Lin28bQ45KJ6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.45■□□□□ 0.22
Lin28bQ45KJ6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lin28bQ45KJ6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lin28bQ45KJ6 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lin28bQ45KJ6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lin28bQ45KJ6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lin28bQ45KJ6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lin28bQ45KJ6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Idnk-204ENSMUST00000226010 1898 ntBASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Lin28bQ45KJ6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lin28bQ45KJ6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Lin28bQ45KJ6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lin28bQ45KJ6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lin28bQ45KJ6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Lin28bQ45KJ6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lin28bQ45KJ6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Lin28bQ45KJ6 Gm33142-201ENSMUST00000193913 867 ntBASIC16.43■□□□□ 0.22
Lin28bQ45KJ6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lin28bQ45KJ6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lin28bQ45KJ6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lin28bQ45KJ6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lin28bQ45KJ6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.43■□□□□ 0.22
Lin28bQ45KJ6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lin28bQ45KJ6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lin28bQ45KJ6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lin28bQ45KJ6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lin28bQ45KJ6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms