Protein–RNA interactions for Protein: Q3ZT31

Snx25, Sorting nexin-25, mousemouse

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx25Q3ZT31 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snx25Q3ZT31 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snx25Q3ZT31 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Snx25Q3ZT31 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Snx25Q3ZT31 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snx25Q3ZT31 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snx25Q3ZT31 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snx25Q3ZT31 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snx25Q3ZT31 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snx25Q3ZT31 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snx25Q3ZT31 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snx25Q3ZT31 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snx25Q3ZT31 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snx25Q3ZT31 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snx25Q3ZT31 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snx25Q3ZT31 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.8■□□□□ 0.6
Snx25Q3ZT31 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snx25Q3ZT31 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Snx25Q3ZT31 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Snx25Q3ZT31 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Snx25Q3ZT31 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snx25Q3ZT31 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Snx25Q3ZT31 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.8■□□□□ 0.6
Snx25Q3ZT31 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snx25Q3ZT31 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.8■□□□□ 0.6
Snx25Q3ZT31 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Snx25Q3ZT31 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx25Q3ZT31 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx25Q3ZT31 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx25Q3ZT31 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx25Q3ZT31 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx25Q3ZT31 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx25Q3ZT31 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx25Q3ZT31 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx25Q3ZT31 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx25Q3ZT31 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Snx25Q3ZT31 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx25Q3ZT31 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx25Q3ZT31 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.79■□□□□ 0.6
Snx25Q3ZT31 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.79■□□□□ 0.6
Snx25Q3ZT31 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Snx25Q3ZT31 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Snx25Q3ZT31 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Snx25Q3ZT31 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx25Q3ZT31 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx25Q3ZT31 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snx25Q3ZT31 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snx25Q3ZT31 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snx25Q3ZT31 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snx25Q3ZT31 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Snx25Q3ZT31 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Snx25Q3ZT31 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Snx25Q3ZT31 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.78■□□□□ 0.6
Snx25Q3ZT31 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snx25Q3ZT31 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snx25Q3ZT31 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Snx25Q3ZT31 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snx25Q3ZT31 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Snx25Q3ZT31 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snx25Q3ZT31 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snx25Q3ZT31 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Snx25Q3ZT31 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Snx25Q3ZT31 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx25Q3ZT31 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx25Q3ZT31 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx25Q3ZT31 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx25Q3ZT31 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx25Q3ZT31 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx25Q3ZT31 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Snx25Q3ZT31 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Snx25Q3ZT31 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx25Q3ZT31 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx25Q3ZT31 Gm7638-201ENSMUST00000121348 967 ntBASIC18.77■□□□□ 0.6
Snx25Q3ZT31 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx25Q3ZT31 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Snx25Q3ZT31 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.77■□□□□ 0.6
Snx25Q3ZT31 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.77■□□□□ 0.6
Snx25Q3ZT31 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx25Q3ZT31 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx25Q3ZT31 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx25Q3ZT31 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Snx25Q3ZT31 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx25Q3ZT31 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Snx25Q3ZT31 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Snx25Q3ZT31 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Snx25Q3ZT31 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snx25Q3ZT31 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Snx25Q3ZT31 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Snx25Q3ZT31 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
Snx25Q3ZT31 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snx25Q3ZT31 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snx25Q3ZT31 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.76■□□□□ 0.59
Snx25Q3ZT31 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Snx25Q3ZT31 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Snx25Q3ZT31 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Snx25Q3ZT31 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.76■□□□□ 0.59
Snx25Q3ZT31 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snx25Q3ZT31 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Snx25Q3ZT31 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snx25Q3ZT31 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms