Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ckap2Q3V1H1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ckap2Q3V1H1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ckap2Q3V1H1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
Ckap2Q3V1H1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ckap2Q3V1H1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Ckap2Q3V1H1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ckap2Q3V1H1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ckap2Q3V1H1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ckap2Q3V1H1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ckap2Q3V1H1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ckap2Q3V1H1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Ckap2Q3V1H1 Gm37055-201ENSMUST00000191866 133 ntBASIC19.86■□□□□ 0.77
Ckap2Q3V1H1 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.86■□□□□ 0.77
Ckap2Q3V1H1 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.86■□□□□ 0.77
Ckap2Q3V1H1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ckap2Q3V1H1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.86■□□□□ 0.77
Ckap2Q3V1H1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ckap2Q3V1H1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ckap2Q3V1H1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ckap2Q3V1H1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ckap2Q3V1H1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ckap2Q3V1H1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ckap2Q3V1H1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ckap2Q3V1H1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ckap2Q3V1H1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ckap2Q3V1H1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.85■□□□□ 0.77
Ckap2Q3V1H1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.85■□□□□ 0.77
Ckap2Q3V1H1 Gm7791-201ENSMUST00000219066 539 ntBASIC19.85■□□□□ 0.77
Ckap2Q3V1H1 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.85■□□□□ 0.77
Ckap2Q3V1H1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ckap2Q3V1H1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ckap2Q3V1H1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ckap2Q3V1H1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ckap2Q3V1H1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ckap2Q3V1H1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ckap2Q3V1H1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Ckap2Q3V1H1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ckap2Q3V1H1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.84■□□□□ 0.77
Ckap2Q3V1H1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.84■□□□□ 0.77
Ckap2Q3V1H1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.84■□□□□ 0.77
Ckap2Q3V1H1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ckap2Q3V1H1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ckap2Q3V1H1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ckap2Q3V1H1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ckap2Q3V1H1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ckap2Q3V1H1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ckap2Q3V1H1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ckap2Q3V1H1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ckap2Q3V1H1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ckap2Q3V1H1 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.83■□□□□ 0.77
Ckap2Q3V1H1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ckap2Q3V1H1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ckap2Q3V1H1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ckap2Q3V1H1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ckap2Q3V1H1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ckap2Q3V1H1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ckap2Q3V1H1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ckap2Q3V1H1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ckap2Q3V1H1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ckap2Q3V1H1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ckap2Q3V1H1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap2Q3V1H1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap2Q3V1H1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap2Q3V1H1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ckap2Q3V1H1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Ckap2Q3V1H1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap2Q3V1H1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.82■□□□□ 0.76
Ckap2Q3V1H1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap2Q3V1H1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Ckap2Q3V1H1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap2Q3V1H1 Gm10252-201ENSMUST00000209541 832 ntBASIC19.82■□□□□ 0.76
Ckap2Q3V1H1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap2Q3V1H1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap2Q3V1H1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ckap2Q3V1H1 Gm5417-201ENSMUST00000079706 384 ntBASIC19.82■□□□□ 0.76
Ckap2Q3V1H1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap2Q3V1H1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Ckap2Q3V1H1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap2Q3V1H1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap2Q3V1H1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap2Q3V1H1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ckap2Q3V1H1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ckap2Q3V1H1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ckap2Q3V1H1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ckap2Q3V1H1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ckap2Q3V1H1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
Ckap2Q3V1H1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ckap2Q3V1H1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ckap2Q3V1H1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Ckap2Q3V1H1 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.81■□□□□ 0.76
Ckap2Q3V1H1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ckap2Q3V1H1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ckap2Q3V1H1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ckap2Q3V1H1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ckap2Q3V1H1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ckap2Q3V1H1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Ckap2Q3V1H1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.81■□□□□ 0.76
Ckap2Q3V1H1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ckap2Q3V1H1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms