Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf223Q3UV31 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf223Q3UV31 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Rnf223Q3UV31 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.79■□□□□ 0.28
Rnf223Q3UV31 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf223Q3UV31 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf223Q3UV31 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.79■□□□□ 0.28
Rnf223Q3UV31 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf223Q3UV31 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.79■□□□□ 0.28
Rnf223Q3UV31 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.79■□□□□ 0.28
Rnf223Q3UV31 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf223Q3UV31 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.79■□□□□ 0.28
Rnf223Q3UV31 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf223Q3UV31 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Rnf223Q3UV31 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf223Q3UV31 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.79■□□□□ 0.28
Rnf223Q3UV31 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.79■□□□□ 0.28
Rnf223Q3UV31 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf223Q3UV31 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf223Q3UV31 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.78■□□□□ 0.28
Rnf223Q3UV31 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
Rnf223Q3UV31 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf223Q3UV31 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf223Q3UV31 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
Rnf223Q3UV31 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf223Q3UV31 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rnf223Q3UV31 Gm18101-201ENSMUST00000215769 548 ntBASIC16.78■□□□□ 0.28
Rnf223Q3UV31 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf223Q3UV31 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf223Q3UV31 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf223Q3UV31 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
Rnf223Q3UV31 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf223Q3UV31 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf223Q3UV31 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rnf223Q3UV31 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf223Q3UV31 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf223Q3UV31 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf223Q3UV31 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Rnf223Q3UV31 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf223Q3UV31 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf223Q3UV31 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf223Q3UV31 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf223Q3UV31 Gm23634-201ENSMUST00000175071 91 ntBASIC16.77■□□□□ 0.28
Rnf223Q3UV31 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf223Q3UV31 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.77■□□□□ 0.28
Rnf223Q3UV31 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.77■□□□□ 0.28
Rnf223Q3UV31 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf223Q3UV31 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf223Q3UV31 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf223Q3UV31 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf223Q3UV31 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.77■□□□□ 0.27
Rnf223Q3UV31 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Rnf223Q3UV31 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf223Q3UV31 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf223Q3UV31 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf223Q3UV31 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.76■□□□□ 0.27
Rnf223Q3UV31 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf223Q3UV31 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf223Q3UV31 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rnf223Q3UV31 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf223Q3UV31 Gm7213-201ENSMUST00000215977 950 ntBASIC16.76■□□□□ 0.27
Rnf223Q3UV31 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.76■□□□□ 0.27
Rnf223Q3UV31 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf223Q3UV31 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Rnf223Q3UV31 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf223Q3UV31 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.76■□□□□ 0.27
Rnf223Q3UV31 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf223Q3UV31 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf223Q3UV31 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.76■□□□□ 0.27
Rnf223Q3UV31 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.76■□□□□ 0.27
Rnf223Q3UV31 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf223Q3UV31 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Rnf223Q3UV31 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf223Q3UV31 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rnf223Q3UV31 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.75■□□□□ 0.27
Rnf223Q3UV31 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.75■□□□□ 0.27
Rnf223Q3UV31 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf223Q3UV31 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf223Q3UV31 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf223Q3UV31 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Rnf223Q3UV31 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf223Q3UV31 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf223Q3UV31 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf223Q3UV31 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf223Q3UV31 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Rnf223Q3UV31 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rnf223Q3UV31 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rnf223Q3UV31 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms