Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Znf48Q3US17 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Znf48Q3US17 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Znf48Q3US17 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Znf48Q3US17 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Znf48Q3US17 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Znf48Q3US17 Gm11434-201ENSMUST00000122379 629 ntBASIC14.28□□□□□ -0.12
Znf48Q3US17 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Znf48Q3US17 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Znf48Q3US17 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Znf48Q3US17 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.28□□□□□ -0.12
Znf48Q3US17 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Znf48Q3US17 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Znf48Q3US17 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Znf48Q3US17 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Znf48Q3US17 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Znf48Q3US17 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Znf48Q3US17 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Znf48Q3US17 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.28□□□□□ -0.12
Znf48Q3US17 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Znf48Q3US17 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Znf48Q3US17 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Znf48Q3US17 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Znf48Q3US17 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.28□□□□□ -0.12
Znf48Q3US17 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Znf48Q3US17 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Znf48Q3US17 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Znf48Q3US17 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Znf48Q3US17 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Znf48Q3US17 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Znf48Q3US17 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Znf48Q3US17 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Znf48Q3US17 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Znf48Q3US17 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Znf48Q3US17 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Znf48Q3US17 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Znf48Q3US17 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Znf48Q3US17 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Znf48Q3US17 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Znf48Q3US17 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Znf48Q3US17 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Znf48Q3US17 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.27□□□□□ -0.13
Znf48Q3US17 Gm30025-201ENSMUST00000218555 728 ntBASIC14.27□□□□□ -0.13
Znf48Q3US17 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.27□□□□□ -0.13
Znf48Q3US17 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Znf48Q3US17 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Znf48Q3US17 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Znf48Q3US17 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Znf48Q3US17 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Znf48Q3US17 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Znf48Q3US17 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Znf48Q3US17 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Znf48Q3US17 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Znf48Q3US17 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Znf48Q3US17 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Znf48Q3US17 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Znf48Q3US17 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.26□□□□□ -0.13
Znf48Q3US17 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Znf48Q3US17 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Znf48Q3US17 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Znf48Q3US17 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Znf48Q3US17 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Znf48Q3US17 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Znf48Q3US17 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Znf48Q3US17 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Znf48Q3US17 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Znf48Q3US17 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Znf48Q3US17 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Znf48Q3US17 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Znf48Q3US17 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Znf48Q3US17 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Znf48Q3US17 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Znf48Q3US17 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Znf48Q3US17 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Znf48Q3US17 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.25□□□□□ -0.13
Znf48Q3US17 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Znf48Q3US17 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.25□□□□□ -0.13
Znf48Q3US17 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Znf48Q3US17 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Znf48Q3US17 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.25□□□□□ -0.13
Znf48Q3US17 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Znf48Q3US17 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Znf48Q3US17 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Znf48Q3US17 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Znf48Q3US17 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Znf48Q3US17 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Znf48Q3US17 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Znf48Q3US17 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Znf48Q3US17 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Znf48Q3US17 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Znf48Q3US17 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Znf48Q3US17 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Znf48Q3US17 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.25□□□□□ -0.13
Znf48Q3US17 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.25□□□□□ -0.13
Znf48Q3US17 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.25□□□□□ -0.13
Znf48Q3US17 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.25□□□□□ -0.13
Znf48Q3US17 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Znf48Q3US17 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Znf48Q3US17 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Znf48Q3US17 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms