Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp30Q3UN04 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.4■□□□□ 0.38
Usp30Q3UN04 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp30Q3UN04 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp30Q3UN04 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp30Q3UN04 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.4■□□□□ 0.38
Usp30Q3UN04 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.4■□□□□ 0.38
Usp30Q3UN04 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp30Q3UN04 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp30Q3UN04 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp30Q3UN04 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp30Q3UN04 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp30Q3UN04 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp30Q3UN04 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp30Q3UN04 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp30Q3UN04 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp30Q3UN04 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp30Q3UN04 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp30Q3UN04 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Usp30Q3UN04 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp30Q3UN04 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Usp30Q3UN04 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp30Q3UN04 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp30Q3UN04 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Usp30Q3UN04 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.39■□□□□ 0.37
Usp30Q3UN04 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp30Q3UN04 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp30Q3UN04 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp30Q3UN04 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.39■□□□□ 0.37
Usp30Q3UN04 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp30Q3UN04 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Usp30Q3UN04 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.39■□□□□ 0.37
Usp30Q3UN04 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp30Q3UN04 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp30Q3UN04 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp30Q3UN04 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Usp30Q3UN04 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp30Q3UN04 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp30Q3UN04 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Usp30Q3UN04 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp30Q3UN04 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp30Q3UN04 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Usp30Q3UN04 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp30Q3UN04 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.38■□□□□ 0.37
Usp30Q3UN04 Gm14859-201ENSMUST00000117752 357 ntBASIC17.38■□□□□ 0.37
Usp30Q3UN04 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Usp30Q3UN04 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp30Q3UN04 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp30Q3UN04 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp30Q3UN04 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp30Q3UN04 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp30Q3UN04 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp30Q3UN04 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.38■□□□□ 0.37
Usp30Q3UN04 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp30Q3UN04 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp30Q3UN04 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp30Q3UN04 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp30Q3UN04 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp30Q3UN04 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Usp30Q3UN04 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp30Q3UN04 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp30Q3UN04 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp30Q3UN04 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp30Q3UN04 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp30Q3UN04 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp30Q3UN04 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.37■□□□□ 0.37
Usp30Q3UN04 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.37■□□□□ 0.37
Usp30Q3UN04 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.37■□□□□ 0.37
Usp30Q3UN04 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Usp30Q3UN04 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp30Q3UN04 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp30Q3UN04 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.37■□□□□ 0.37
Usp30Q3UN04 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp30Q3UN04 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp30Q3UN04 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp30Q3UN04 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.36■□□□□ 0.37
Usp30Q3UN04 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.36■□□□□ 0.37
Usp30Q3UN04 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp30Q3UN04 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp30Q3UN04 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Usp30Q3UN04 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp30Q3UN04 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
Usp30Q3UN04 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Usp30Q3UN04 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp30Q3UN04 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp30Q3UN04 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp30Q3UN04 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp30Q3UN04 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Usp30Q3UN04 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp30Q3UN04 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp30Q3UN04 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp30Q3UN04 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Usp30Q3UN04 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp30Q3UN04 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Usp30Q3UN04 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp30Q3UN04 Gm11355-201ENSMUST00000121120 306 ntBASIC17.35■□□□□ 0.37
Usp30Q3UN04 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp30Q3UN04 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp30Q3UN04 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp30Q3UN04 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms