Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Naf1Q3UMQ8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Naf1Q3UMQ8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Naf1Q3UMQ8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Naf1Q3UMQ8 Gm9731-201ENSMUST00000209480 747 ntBASIC17.59■□□□□ 0.41
Naf1Q3UMQ8 Gm7370-201ENSMUST00000219471 767 ntBASIC17.59■□□□□ 0.41
Naf1Q3UMQ8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Naf1Q3UMQ8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.59■□□□□ 0.41
Naf1Q3UMQ8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Naf1Q3UMQ8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.59■□□□□ 0.41
Naf1Q3UMQ8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Naf1Q3UMQ8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Naf1Q3UMQ8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Naf1Q3UMQ8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Naf1Q3UMQ8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Naf1Q3UMQ8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Naf1Q3UMQ8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Naf1Q3UMQ8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Naf1Q3UMQ8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Naf1Q3UMQ8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Naf1Q3UMQ8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Naf1Q3UMQ8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Naf1Q3UMQ8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.58■□□□□ 0.4
Naf1Q3UMQ8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Naf1Q3UMQ8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Naf1Q3UMQ8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 Gm37025-201ENSMUST00000195159 829 ntBASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 Il3ra-202ENSMUST00000223589 738 ntBASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.57■□□□□ 0.4
Naf1Q3UMQ8 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.56■□□□□ 0.4
Naf1Q3UMQ8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Naf1Q3UMQ8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Naf1Q3UMQ8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.56■□□□□ 0.4
Naf1Q3UMQ8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Naf1Q3UMQ8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Naf1Q3UMQ8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Naf1Q3UMQ8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Naf1Q3UMQ8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Naf1Q3UMQ8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Naf1Q3UMQ8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Naf1Q3UMQ8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Naf1Q3UMQ8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Naf1Q3UMQ8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Naf1Q3UMQ8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Naf1Q3UMQ8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.56■□□□□ 0.4
Naf1Q3UMQ8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Naf1Q3UMQ8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Naf1Q3UMQ8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Naf1Q3UMQ8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Naf1Q3UMQ8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Naf1Q3UMQ8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Naf1Q3UMQ8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Naf1Q3UMQ8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Naf1Q3UMQ8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms