Protein–RNA interactions for Protein: Q3UM18

Lsg1, Large subunit GTPase 1 homolog, mousemouse

Known RBP Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsg1Q3UM18 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsg1Q3UM18 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsg1Q3UM18 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsg1Q3UM18 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsg1Q3UM18 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.8■□□□□ 0.28
Lsg1Q3UM18 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsg1Q3UM18 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Lsg1Q3UM18 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsg1Q3UM18 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsg1Q3UM18 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lsg1Q3UM18 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsg1Q3UM18 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Lsg1Q3UM18 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Lsg1Q3UM18 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsg1Q3UM18 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.79■□□□□ 0.28
Lsg1Q3UM18 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lsg1Q3UM18 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsg1Q3UM18 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Lsg1Q3UM18 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lsg1Q3UM18 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsg1Q3UM18 Mir5133-201ENSMUST00000174955 77 ntBASIC16.79■□□□□ 0.28
Lsg1Q3UM18 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.79■□□□□ 0.28
Lsg1Q3UM18 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.79■□□□□ 0.28
Lsg1Q3UM18 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Lsg1Q3UM18 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Lsg1Q3UM18 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsg1Q3UM18 Dancr-204ENSMUST00000132389 2347 ntBASIC16.79■□□□□ 0.28
Lsg1Q3UM18 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.79■□□□□ 0.28
Lsg1Q3UM18 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsg1Q3UM18 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Lsg1Q3UM18 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsg1Q3UM18 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsg1Q3UM18 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsg1Q3UM18 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsg1Q3UM18 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lsg1Q3UM18 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsg1Q3UM18 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsg1Q3UM18 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.77■□□□□ 0.28
Lsg1Q3UM18 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsg1Q3UM18 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsg1Q3UM18 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsg1Q3UM18 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsg1Q3UM18 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lsg1Q3UM18 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsg1Q3UM18 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.77■□□□□ 0.28
Lsg1Q3UM18 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.77■□□□□ 0.28
Lsg1Q3UM18 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.77■□□□□ 0.28
Lsg1Q3UM18 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.77■□□□□ 0.28
Lsg1Q3UM18 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsg1Q3UM18 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsg1Q3UM18 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsg1Q3UM18 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lsg1Q3UM18 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lsg1Q3UM18 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lsg1Q3UM18 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lsg1Q3UM18 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsg1Q3UM18 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsg1Q3UM18 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Lsg1Q3UM18 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsg1Q3UM18 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.76■□□□□ 0.27
Lsg1Q3UM18 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsg1Q3UM18 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.76■□□□□ 0.27
Lsg1Q3UM18 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsg1Q3UM18 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Lsg1Q3UM18 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsg1Q3UM18 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsg1Q3UM18 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Lsg1Q3UM18 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsg1Q3UM18 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsg1Q3UM18 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Lsg1Q3UM18 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsg1Q3UM18 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsg1Q3UM18 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsg1Q3UM18 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsg1Q3UM18 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsg1Q3UM18 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsg1Q3UM18 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsg1Q3UM18 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lsg1Q3UM18 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms