Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Tnrc6aQ3UHK8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnrc6aQ3UHK8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tnrc6aQ3UHK8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Tnrc6aQ3UHK8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnrc6aQ3UHK8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnrc6aQ3UHK8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Tnrc6aQ3UHK8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnrc6aQ3UHK8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnrc6aQ3UHK8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnrc6aQ3UHK8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnrc6aQ3UHK8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnrc6aQ3UHK8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Tnrc6aQ3UHK8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Mir770-201ENSMUST00000103252 94 ntBASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnrc6aQ3UHK8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Tnrc6aQ3UHK8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Tnrc6aQ3UHK8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tnrc6aQ3UHK8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tnrc6aQ3UHK8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tnrc6aQ3UHK8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.02■□□□□ 0.16
Tnrc6aQ3UHK8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Tnrc6aQ3UHK8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Tnrc6aQ3UHK8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Tnrc6aQ3UHK8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Tnrc6aQ3UHK8 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.02■□□□□ 0.16
Tnrc6aQ3UHK8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tnrc6aQ3UHK8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tnrc6aQ3UHK8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Tnrc6aQ3UHK8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tnrc6aQ3UHK8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.02■□□□□ 0.15
Tnrc6aQ3UHK8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tnrc6aQ3UHK8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tnrc6aQ3UHK8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tnrc6aQ3UHK8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Tnrc6aQ3UHK8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Tnrc6aQ3UHK8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.01■□□□□ 0.15
Tnrc6aQ3UHK8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16■□□□□ 0.15
Tnrc6aQ3UHK8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Tnrc6aQ3UHK8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tnrc6aQ3UHK8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tnrc6aQ3UHK8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tnrc6aQ3UHK8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tnrc6aQ3UHK8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tnrc6aQ3UHK8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Tnrc6aQ3UHK8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tnrc6aQ3UHK8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tnrc6aQ3UHK8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tnrc6aQ3UHK8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Tnrc6aQ3UHK8 Rarb-207ENSMUST00000225921 2756 ntBASIC16■□□□□ 0.15
Tnrc6aQ3UHK8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tnrc6aQ3UHK8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16■□□□□ 0.15
Tnrc6aQ3UHK8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms