Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf44Q3UHJ8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.75■□□□□ 0.27
Rnf44Q3UHJ8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rnf44Q3UHJ8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.74■□□□□ 0.27
Rnf44Q3UHJ8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf44Q3UHJ8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf44Q3UHJ8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf44Q3UHJ8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf44Q3UHJ8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf44Q3UHJ8 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.74■□□□□ 0.27
Rnf44Q3UHJ8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
Rnf44Q3UHJ8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf44Q3UHJ8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf44Q3UHJ8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rnf44Q3UHJ8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf44Q3UHJ8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf44Q3UHJ8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf44Q3UHJ8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf44Q3UHJ8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf44Q3UHJ8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Rnf44Q3UHJ8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf44Q3UHJ8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf44Q3UHJ8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf44Q3UHJ8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rnf44Q3UHJ8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rnf44Q3UHJ8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf44Q3UHJ8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rnf44Q3UHJ8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf44Q3UHJ8 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.73■□□□□ 0.27
Rnf44Q3UHJ8 Gm3375-201ENSMUST00000203929 796 ntBASIC16.73■□□□□ 0.27
Rnf44Q3UHJ8 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.73■□□□□ 0.27
Rnf44Q3UHJ8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf44Q3UHJ8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rnf44Q3UHJ8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf44Q3UHJ8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf44Q3UHJ8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf44Q3UHJ8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.73■□□□□ 0.27
Rnf44Q3UHJ8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf44Q3UHJ8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rnf44Q3UHJ8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf44Q3UHJ8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Rnf44Q3UHJ8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf44Q3UHJ8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf44Q3UHJ8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf44Q3UHJ8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf44Q3UHJ8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf44Q3UHJ8 Gm37055-201ENSMUST00000191866 133 ntBASIC16.72■□□□□ 0.27
Rnf44Q3UHJ8 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.72■□□□□ 0.27
Rnf44Q3UHJ8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf44Q3UHJ8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf44Q3UHJ8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf44Q3UHJ8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf44Q3UHJ8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf44Q3UHJ8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf44Q3UHJ8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 Gm12085-201ENSMUST00000119263 940 ntBASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 Gm38027-201ENSMUST00000192315 235 ntBASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf44Q3UHJ8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Rnf44Q3UHJ8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rnf44Q3UHJ8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf44Q3UHJ8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf44Q3UHJ8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf44Q3UHJ8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Rnf44Q3UHJ8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf44Q3UHJ8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf44Q3UHJ8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf44Q3UHJ8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf44Q3UHJ8 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.7■□□□□ 0.26
Rnf44Q3UHJ8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf44Q3UHJ8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.7■□□□□ 0.26
Rnf44Q3UHJ8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf44Q3UHJ8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf44Q3UHJ8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf44Q3UHJ8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf44Q3UHJ8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf44Q3UHJ8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf44Q3UHJ8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rnf44Q3UHJ8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.69■□□□□ 0.26
Rnf44Q3UHJ8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.69■□□□□ 0.26
Rnf44Q3UHJ8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms