Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rapgef1Q3UHC1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rapgef1Q3UHC1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.93■□□□□ 0.62
Rapgef1Q3UHC1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rapgef1Q3UHC1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rapgef1Q3UHC1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rapgef1Q3UHC1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rapgef1Q3UHC1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rapgef1Q3UHC1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rapgef1Q3UHC1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rapgef1Q3UHC1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rapgef1Q3UHC1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Rapgef1Q3UHC1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rapgef1Q3UHC1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rapgef1Q3UHC1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rapgef1Q3UHC1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rapgef1Q3UHC1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rapgef1Q3UHC1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rapgef1Q3UHC1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rapgef1Q3UHC1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rapgef1Q3UHC1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rapgef1Q3UHC1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rapgef1Q3UHC1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rapgef1Q3UHC1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.91■□□□□ 0.62
Rapgef1Q3UHC1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rapgef1Q3UHC1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rapgef1Q3UHC1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rapgef1Q3UHC1 Gm10418-201ENSMUST00000100943 576 ntBASIC18.91■□□□□ 0.62
Rapgef1Q3UHC1 Mir1199-201ENSMUST00000117015 119 ntBASIC18.91■□□□□ 0.62
Rapgef1Q3UHC1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rapgef1Q3UHC1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.91■□□□□ 0.62
Rapgef1Q3UHC1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rapgef1Q3UHC1 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.91■□□□□ 0.62
Rapgef1Q3UHC1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.91■□□□□ 0.62
Rapgef1Q3UHC1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rapgef1Q3UHC1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rapgef1Q3UHC1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rapgef1Q3UHC1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rapgef1Q3UHC1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rapgef1Q3UHC1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rapgef1Q3UHC1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rapgef1Q3UHC1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rapgef1Q3UHC1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rapgef1Q3UHC1 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.9■□□□□ 0.62
Rapgef1Q3UHC1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rapgef1Q3UHC1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rapgef1Q3UHC1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rapgef1Q3UHC1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Rapgef1Q3UHC1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rapgef1Q3UHC1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rapgef1Q3UHC1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rapgef1Q3UHC1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rapgef1Q3UHC1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rapgef1Q3UHC1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.9■□□□□ 0.62
Rapgef1Q3UHC1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.9■□□□□ 0.62
Rapgef1Q3UHC1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rapgef1Q3UHC1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rapgef1Q3UHC1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rapgef1Q3UHC1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rapgef1Q3UHC1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rapgef1Q3UHC1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rapgef1Q3UHC1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rapgef1Q3UHC1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rapgef1Q3UHC1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Rapgef1Q3UHC1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rapgef1Q3UHC1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rapgef1Q3UHC1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rapgef1Q3UHC1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.89■□□□□ 0.61
Rapgef1Q3UHC1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.89■□□□□ 0.61
Rapgef1Q3UHC1 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.89■□□□□ 0.61
Rapgef1Q3UHC1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rapgef1Q3UHC1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rapgef1Q3UHC1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rapgef1Q3UHC1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rapgef1Q3UHC1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rapgef1Q3UHC1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rapgef1Q3UHC1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rapgef1Q3UHC1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rapgef1Q3UHC1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rapgef1Q3UHC1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rapgef1Q3UHC1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rapgef1Q3UHC1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rapgef1Q3UHC1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rapgef1Q3UHC1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rapgef1Q3UHC1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.88■□□□□ 0.61
Rapgef1Q3UHC1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rapgef1Q3UHC1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rapgef1Q3UHC1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rapgef1Q3UHC1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.88■□□□□ 0.61
Rapgef1Q3UHC1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rapgef1Q3UHC1 Gm715-201ENSMUST00000117865 831 ntBASIC18.88■□□□□ 0.61
Rapgef1Q3UHC1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rapgef1Q3UHC1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.88■□□□□ 0.61
Rapgef1Q3UHC1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.88■□□□□ 0.61
Rapgef1Q3UHC1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.88■□□□□ 0.61
Rapgef1Q3UHC1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rapgef1Q3UHC1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rapgef1Q3UHC1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rapgef1Q3UHC1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rapgef1Q3UHC1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms