Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.99■□□□□ 0.15
Spg11Q3UHA3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.99■□□□□ 0.15
Spg11Q3UHA3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Spg11Q3UHA3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Spg11Q3UHA3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.99■□□□□ 0.15
Spg11Q3UHA3 Gm6089-201ENSMUST00000197666 938 ntBASIC15.99■□□□□ 0.15
Spg11Q3UHA3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Spg11Q3UHA3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Spg11Q3UHA3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Spg11Q3UHA3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Spg11Q3UHA3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Spg11Q3UHA3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Spg11Q3UHA3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.98■□□□□ 0.15
Spg11Q3UHA3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.98■□□□□ 0.15
Spg11Q3UHA3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Spg11Q3UHA3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Spg11Q3UHA3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Spg11Q3UHA3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Spg11Q3UHA3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Spg11Q3UHA3 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.98■□□□□ 0.15
Spg11Q3UHA3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Spg11Q3UHA3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Spg11Q3UHA3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.98■□□□□ 0.15
Spg11Q3UHA3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Spg11Q3UHA3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Spg11Q3UHA3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.98■□□□□ 0.15
Spg11Q3UHA3 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.98■□□□□ 0.15
Spg11Q3UHA3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Spg11Q3UHA3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Spg11Q3UHA3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Spg11Q3UHA3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.98■□□□□ 0.15
Spg11Q3UHA3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Spg11Q3UHA3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Spg11Q3UHA3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Spg11Q3UHA3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Spg11Q3UHA3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Spg11Q3UHA3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.97■□□□□ 0.15
Spg11Q3UHA3 Gm20949-201ENSMUST00000206478 952 ntBASIC15.97■□□□□ 0.15
Spg11Q3UHA3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Spg11Q3UHA3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Spg11Q3UHA3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Spg11Q3UHA3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Spg11Q3UHA3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Spg11Q3UHA3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.97■□□□□ 0.15
Spg11Q3UHA3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Spg11Q3UHA3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Spg11Q3UHA3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Spg11Q3UHA3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.97■□□□□ 0.15
Spg11Q3UHA3 Gm6550-201ENSMUST00000187574 993 ntBASIC15.97■□□□□ 0.15
Spg11Q3UHA3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.97■□□□□ 0.15
Spg11Q3UHA3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Spg11Q3UHA3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Spg11Q3UHA3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Spg11Q3UHA3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Spg11Q3UHA3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Spg11Q3UHA3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Spg11Q3UHA3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Spg11Q3UHA3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Spg11Q3UHA3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Spg11Q3UHA3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Spg11Q3UHA3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Spg11Q3UHA3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.96■□□□□ 0.15
Spg11Q3UHA3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Spg11Q3UHA3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.96■□□□□ 0.14
Spg11Q3UHA3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Spg11Q3UHA3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Spg11Q3UHA3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Spg11Q3UHA3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Spg11Q3UHA3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Spg11Q3UHA3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Spg11Q3UHA3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Spg11Q3UHA3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Spg11Q3UHA3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Spg11Q3UHA3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Spg11Q3UHA3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Spg11Q3UHA3 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.95■□□□□ 0.14
Spg11Q3UHA3 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.95■□□□□ 0.14
Spg11Q3UHA3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Spg11Q3UHA3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Spg11Q3UHA3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Spg11Q3UHA3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Spg11Q3UHA3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.95■□□□□ 0.14
Spg11Q3UHA3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.95■□□□□ 0.14
Spg11Q3UHA3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Spg11Q3UHA3 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.95■□□□□ 0.14
Spg11Q3UHA3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Spg11Q3UHA3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Spg11Q3UHA3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Spg11Q3UHA3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Spg11Q3UHA3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Spg11Q3UHA3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Spg11Q3UHA3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Spg11Q3UHA3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
Spg11Q3UHA3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Spg11Q3UHA3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Spg11Q3UHA3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Spg11Q3UHA3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Spg11Q3UHA3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Spg11Q3UHA3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Spg11Q3UHA3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms