Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim7Q3TJD7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim7Q3TJD7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim7Q3TJD7 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim7Q3TJD7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.47■□□□□ 0.71
Pdlim7Q3TJD7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim7Q3TJD7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim7Q3TJD7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim7Q3TJD7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim7Q3TJD7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.46■□□□□ 0.71
Pdlim7Q3TJD7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim7Q3TJD7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim7Q3TJD7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Pdlim7Q3TJD7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim7Q3TJD7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim7Q3TJD7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim7Q3TJD7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim7Q3TJD7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim7Q3TJD7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim7Q3TJD7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim7Q3TJD7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim7Q3TJD7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim7Q3TJD7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim7Q3TJD7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim7Q3TJD7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim7Q3TJD7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.45■□□□□ 0.7
Pdlim7Q3TJD7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim7Q3TJD7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim7Q3TJD7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim7Q3TJD7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim7Q3TJD7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.45■□□□□ 0.7
Pdlim7Q3TJD7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim7Q3TJD7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim7Q3TJD7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim7Q3TJD7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pdlim7Q3TJD7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim7Q3TJD7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.44■□□□□ 0.7
Pdlim7Q3TJD7 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pdlim7Q3TJD7 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
Pdlim7Q3TJD7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim7Q3TJD7 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
Pdlim7Q3TJD7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.44■□□□□ 0.7
Pdlim7Q3TJD7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim7Q3TJD7 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim7Q3TJD7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Pdlim7Q3TJD7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim7Q3TJD7 Gm12895-201ENSMUST00000122214 226 ntBASIC19.43■□□□□ 0.7
Pdlim7Q3TJD7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.43■□□□□ 0.7
Pdlim7Q3TJD7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.43■□□□□ 0.7
Pdlim7Q3TJD7 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pdlim7Q3TJD7 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.43■□□□□ 0.7
Pdlim7Q3TJD7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pdlim7Q3TJD7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim7Q3TJD7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim7Q3TJD7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim7Q3TJD7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim7Q3TJD7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pdlim7Q3TJD7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pdlim7Q3TJD7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.41■□□□□ 0.7
Pdlim7Q3TJD7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pdlim7Q3TJD7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pdlim7Q3TJD7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim7Q3TJD7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim7Q3TJD7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.41■□□□□ 0.7
Pdlim7Q3TJD7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.41■□□□□ 0.7
Pdlim7Q3TJD7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim7Q3TJD7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim7Q3TJD7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim7Q3TJD7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim7Q3TJD7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Pdlim7Q3TJD7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim7Q3TJD7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.41■□□□□ 0.7
Pdlim7Q3TJD7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim7Q3TJD7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.41■□□□□ 0.7
Pdlim7Q3TJD7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim7Q3TJD7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdlim7Q3TJD7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Pdlim7Q3TJD7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdlim7Q3TJD7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms