Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc4Q3TCX3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc4Q3TCX3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc4Q3TCX3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc4Q3TCX3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc4Q3TCX3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc4Q3TCX3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Khdc4Q3TCX3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.48■□□□□ 0.23
Khdc4Q3TCX3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc4Q3TCX3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.48■□□□□ 0.23
Khdc4Q3TCX3 Gm3375-201ENSMUST00000203929 796 ntBASIC16.48■□□□□ 0.23
Khdc4Q3TCX3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.48■□□□□ 0.23
Khdc4Q3TCX3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc4Q3TCX3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc4Q3TCX3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Khdc4Q3TCX3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc4Q3TCX3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Khdc4Q3TCX3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc4Q3TCX3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc4Q3TCX3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc4Q3TCX3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc4Q3TCX3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Khdc4Q3TCX3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc4Q3TCX3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc4Q3TCX3 Gm7889-201ENSMUST00000185591 958 ntBASIC16.47■□□□□ 0.23
Khdc4Q3TCX3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc4Q3TCX3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc4Q3TCX3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Khdc4Q3TCX3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc4Q3TCX3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc4Q3TCX3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc4Q3TCX3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc4Q3TCX3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc4Q3TCX3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc4Q3TCX3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc4Q3TCX3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc4Q3TCX3 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.47■□□□□ 0.23
Khdc4Q3TCX3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc4Q3TCX3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc4Q3TCX3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc4Q3TCX3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc4Q3TCX3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc4Q3TCX3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc4Q3TCX3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc4Q3TCX3 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.46■□□□□ 0.23
Khdc4Q3TCX3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc4Q3TCX3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc4Q3TCX3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc4Q3TCX3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Khdc4Q3TCX3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Khdc4Q3TCX3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.46■□□□□ 0.23
Khdc4Q3TCX3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc4Q3TCX3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Khdc4Q3TCX3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc4Q3TCX3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.46■□□□□ 0.23
Khdc4Q3TCX3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc4Q3TCX3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Khdc4Q3TCX3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc4Q3TCX3 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.45■□□□□ 0.22
Khdc4Q3TCX3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc4Q3TCX3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc4Q3TCX3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc4Q3TCX3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.45■□□□□ 0.22
Khdc4Q3TCX3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.45■□□□□ 0.22
Khdc4Q3TCX3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc4Q3TCX3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc4Q3TCX3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc4Q3TCX3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.45■□□□□ 0.22
Khdc4Q3TCX3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc4Q3TCX3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc4Q3TCX3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc4Q3TCX3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.45■□□□□ 0.22
Khdc4Q3TCX3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Khdc4Q3TCX3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.44■□□□□ 0.22
Khdc4Q3TCX3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Khdc4Q3TCX3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Khdc4Q3TCX3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms