Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 AC154855.1-201ENSMUST00000227353 1458 ntBASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Gm5866-201ENSMUST00000177881 973 ntBASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 AC126028.2-201ENSMUST00000228100 1833 ntBASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Gm11764-201ENSMUST00000120221 623 ntBASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ush2AQ2QI47 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ush2AQ2QI47 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Ush2AQ2QI47 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ush2AQ2QI47 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ush2AQ2QI47 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ush2AQ2QI47 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Ush2AQ2QI47 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ush2AQ2QI47 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ush2AQ2QI47 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ush2AQ2QI47 AC174742.1-201ENSMUST00000218272 304 ntBASIC9.28□□□□□ -0.92
Ush2AQ2QI47 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ush2AQ2QI47 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ush2AQ2QI47 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ush2AQ2QI47 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Ush2AQ2QI47 AC125206.2-201ENSMUST00000217454 574 ntBASIC9.28□□□□□ -0.92
Ush2AQ2QI47 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ush2AQ2QI47 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ush2AQ2QI47 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ush2AQ2QI47 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ush2AQ2QI47 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ush2AQ2QI47 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ush2AQ2QI47 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ush2AQ2QI47 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Ush2AQ2QI47 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Ush2AQ2QI47 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC9.27□□□□□ -0.92
Ush2AQ2QI47 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
Ush2AQ2QI47 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC9.27□□□□□ -0.92
Ush2AQ2QI47 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ush2AQ2QI47 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC9.27□□□□□ -0.93
Ush2AQ2QI47 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ush2AQ2QI47 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ush2AQ2QI47 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ush2AQ2QI47 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC9.27□□□□□ -0.93
Ush2AQ2QI47 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC9.27□□□□□ -0.93
Ush2AQ2QI47 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC9.27□□□□□ -0.93
Ush2AQ2QI47 Gm37025-201ENSMUST00000195159 829 ntBASIC9.27□□□□□ -0.93
Ush2AQ2QI47 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC9.27□□□□□ -0.93
Ush2AQ2QI47 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ush2AQ2QI47 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ush2AQ2QI47 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Ush2AQ2QI47 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ush2AQ2QI47 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Ush2AQ2QI47 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ush2AQ2QI47 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Ush2AQ2QI47 Gm42934-201ENSMUST00000196920 1345 ntBASIC9.27□□□□□ -0.93
Ush2AQ2QI47 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 AC152827.1-201ENSMUST00000221143 2189 ntBASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Tgds-204ENSMUST00000228543 1594 ntBASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms