Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim72Q1XH17 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim72Q1XH17 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim72Q1XH17 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim72Q1XH17 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim72Q1XH17 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim72Q1XH17 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Trim72Q1XH17 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.46■□□□□ 0.55
Trim72Q1XH17 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim72Q1XH17 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim72Q1XH17 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim72Q1XH17 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim72Q1XH17 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim72Q1XH17 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.46■□□□□ 0.54
Trim72Q1XH17 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim72Q1XH17 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim72Q1XH17 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim72Q1XH17 Gm37025-201ENSMUST00000195159 829 ntBASIC18.45■□□□□ 0.54
Trim72Q1XH17 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim72Q1XH17 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim72Q1XH17 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trim72Q1XH17 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim72Q1XH17 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trim72Q1XH17 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim72Q1XH17 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim72Q1XH17 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim72Q1XH17 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim72Q1XH17 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim72Q1XH17 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim72Q1XH17 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim72Q1XH17 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Trim72Q1XH17 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trim72Q1XH17 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim72Q1XH17 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim72Q1XH17 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.44■□□□□ 0.54
Trim72Q1XH17 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.44■□□□□ 0.54
Trim72Q1XH17 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim72Q1XH17 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim72Q1XH17 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim72Q1XH17 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim72Q1XH17 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim72Q1XH17 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim72Q1XH17 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim72Q1XH17 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Trim72Q1XH17 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim72Q1XH17 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim72Q1XH17 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim72Q1XH17 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trim72Q1XH17 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim72Q1XH17 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim72Q1XH17 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim72Q1XH17 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trim72Q1XH17 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim72Q1XH17 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.42■□□□□ 0.54
Trim72Q1XH17 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.42■□□□□ 0.54
Trim72Q1XH17 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim72Q1XH17 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.42■□□□□ 0.54
Trim72Q1XH17 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim72Q1XH17 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim72Q1XH17 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim72Q1XH17 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.42■□□□□ 0.54
Trim72Q1XH17 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim72Q1XH17 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim72Q1XH17 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim72Q1XH17 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim72Q1XH17 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim72Q1XH17 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim72Q1XH17 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim72Q1XH17 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim72Q1XH17 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trim72Q1XH17 Gm715-201ENSMUST00000117865 831 ntBASIC18.41■□□□□ 0.54
Trim72Q1XH17 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim72Q1XH17 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.41■□□□□ 0.54
Trim72Q1XH17 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.41■□□□□ 0.54
Trim72Q1XH17 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.41■□□□□ 0.54
Trim72Q1XH17 Timm23-208ENSMUST00000226683 750 ntBASIC18.41■□□□□ 0.54
Trim72Q1XH17 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trim72Q1XH17 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trim72Q1XH17 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim72Q1XH17 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim72Q1XH17 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim72Q1XH17 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim72Q1XH17 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim72Q1XH17 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim72Q1XH17 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim72Q1XH17 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim72Q1XH17 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
Trim72Q1XH17 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trim72Q1XH17 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.4■□□□□ 0.54
Trim72Q1XH17 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim72Q1XH17 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim72Q1XH17 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.4■□□□□ 0.54
Trim72Q1XH17 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim72Q1XH17 Gm17661-201ENSMUST00000170317 270 ntBASIC18.4■□□□□ 0.54
Trim72Q1XH17 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim72Q1XH17 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim72Q1XH17 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim72Q1XH17 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim72Q1XH17 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim72Q1XH17 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms