Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 Gm7290-201ENSMUST00000104990 617 ntBASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 Gm12918-201ENSMUST00000120234 636 ntBASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 Gm15710-201ENSMUST00000121821 636 ntBASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 Gm5075-201ENSMUST00000196916 622 ntBASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptchd3Q0EEE2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ptchd3Q0EEE2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ptchd3Q0EEE2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptchd3Q0EEE2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptchd3Q0EEE2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ptchd3Q0EEE2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ptchd3Q0EEE2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptchd3Q0EEE2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.72■□□□□ 0.27
Ptchd3Q0EEE2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptchd3Q0EEE2 Gm22325-201ENSMUST00000158904 308 ntBASIC16.72■□□□□ 0.27
Ptchd3Q0EEE2 Gm6211-202ENSMUST00000167849 925 ntBASIC16.72■□□□□ 0.27
Ptchd3Q0EEE2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.72■□□□□ 0.27
Ptchd3Q0EEE2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ptchd3Q0EEE2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptchd3Q0EEE2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptchd3Q0EEE2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptchd3Q0EEE2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptchd3Q0EEE2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptchd3Q0EEE2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ptchd3Q0EEE2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptchd3Q0EEE2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Haglr-201ENSMUST00000100000 2085 ntBASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptchd3Q0EEE2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ptchd3Q0EEE2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ptchd3Q0EEE2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Ptchd3Q0EEE2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptchd3Q0EEE2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptchd3Q0EEE2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptchd3Q0EEE2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptchd3Q0EEE2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ptchd3Q0EEE2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Ptchd3Q0EEE2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptchd3Q0EEE2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptchd3Q0EEE2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Ptchd3Q0EEE2 Mir5133-201ENSMUST00000174955 77 ntBASIC16.7■□□□□ 0.26
Ptchd3Q0EEE2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptchd3Q0EEE2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ptchd3Q0EEE2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ptchd3Q0EEE2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptchd3Q0EEE2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptchd3Q0EEE2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ptchd3Q0EEE2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ptchd3Q0EEE2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptchd3Q0EEE2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptchd3Q0EEE2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ptchd3Q0EEE2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ptchd3Q0EEE2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ptchd3Q0EEE2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms