Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdx4Q07424 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cdx4Q07424 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdx4Q07424 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdx4Q07424 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cdx4Q07424 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdx4Q07424 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdx4Q07424 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdx4Q07424 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdx4Q07424 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdx4Q07424 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdx4Q07424 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdx4Q07424 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdx4Q07424 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdx4Q07424 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.39□□□□□ -0.27
Cdx4Q07424 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Cdx4Q07424 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdx4Q07424 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdx4Q07424 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdx4Q07424 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx4Q07424 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx4Q07424 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx4Q07424 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cdx4Q07424 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.38□□□□□ -0.27
Cdx4Q07424 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdx4Q07424 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx4Q07424 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdx4Q07424 Gm38285-201ENSMUST00000192928 922 ntBASIC13.38□□□□□ -0.27
Cdx4Q07424 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.38□□□□□ -0.27
Cdx4Q07424 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cdx4Q07424 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.38□□□□□ -0.27
Cdx4Q07424 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx4Q07424 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx4Q07424 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx4Q07424 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx4Q07424 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx4Q07424 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cdx4Q07424 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cdx4Q07424 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.37□□□□□ -0.27
Cdx4Q07424 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cdx4Q07424 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.37□□□□□ -0.27
Cdx4Q07424 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cdx4Q07424 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.37□□□□□ -0.27
Cdx4Q07424 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Cdx4Q07424 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.37□□□□□ -0.27
Cdx4Q07424 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.37□□□□□ -0.27
Cdx4Q07424 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.37□□□□□ -0.27
Cdx4Q07424 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.37□□□□□ -0.27
Cdx4Q07424 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Zfp783-201ENSMUST00000095946 670 ntBASIC13.37□□□□□ -0.27
Cdx4Q07424 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.37□□□□□ -0.27
Cdx4Q07424 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx4Q07424 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx4Q07424 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx4Q07424 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx4Q07424 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cdx4Q07424 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx4Q07424 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx4Q07424 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
Cdx4Q07424 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx4Q07424 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx4Q07424 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx4Q07424 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx4Q07424 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx4Q07424 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cdx4Q07424 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdx4Q07424 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx4Q07424 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdx4Q07424 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.36□□□□□ -0.27
Cdx4Q07424 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx4Q07424 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx4Q07424 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx4Q07424 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx4Q07424 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx4Q07424 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdx4Q07424 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdx4Q07424 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx4Q07424 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms