Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh6P97326 Odf3b-204ENSMUST00000227834 930 ntBASIC17.56■□□□□ 0.4
Cdh6P97326 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh6P97326 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Cdh6P97326 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh6P97326 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh6P97326 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh6P97326 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Cdh6P97326 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh6P97326 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh6P97326 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh6P97326 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Cdh6P97326 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh6P97326 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.55■□□□□ 0.4
Cdh6P97326 Gm12085-201ENSMUST00000119263 940 ntBASIC17.55■□□□□ 0.4
Cdh6P97326 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.55■□□□□ 0.4
Cdh6P97326 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Cdh6P97326 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh6P97326 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.55■□□□□ 0.4
Cdh6P97326 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.55■□□□□ 0.4
Cdh6P97326 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh6P97326 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh6P97326 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh6P97326 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cdh6P97326 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.55■□□□□ 0.4
Cdh6P97326 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh6P97326 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh6P97326 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh6P97326 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh6P97326 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh6P97326 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh6P97326 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh6P97326 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh6P97326 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.54■□□□□ 0.4
Cdh6P97326 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.54■□□□□ 0.4
Cdh6P97326 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.54■□□□□ 0.4
Cdh6P97326 Mir5122-201ENSMUST00000175004 89 ntBASIC17.54■□□□□ 0.4
Cdh6P97326 Gm38027-201ENSMUST00000192315 235 ntBASIC17.54■□□□□ 0.4
Cdh6P97326 Gm37025-201ENSMUST00000195159 829 ntBASIC17.54■□□□□ 0.4
Cdh6P97326 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh6P97326 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh6P97326 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh6P97326 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh6P97326 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.54■□□□□ 0.4
Cdh6P97326 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh6P97326 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh6P97326 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh6P97326 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh6P97326 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh6P97326 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Cdh6P97326 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.53■□□□□ 0.4
Cdh6P97326 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cdh6P97326 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh6P97326 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh6P97326 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh6P97326 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Cdh6P97326 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cdh6P97326 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh6P97326 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cdh6P97326 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.52■□□□□ 0.4
Cdh6P97326 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh6P97326 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh6P97326 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh6P97326 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh6P97326 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.52■□□□□ 0.4
Cdh6P97326 Gm21814-202ENSMUST00000203277 873 ntBASIC17.52■□□□□ 0.4
Cdh6P97326 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.52■□□□□ 0.4
Cdh6P97326 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh6P97326 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdh6P97326 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdh6P97326 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdh6P97326 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh6P97326 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh6P97326 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh6P97326 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Cdh6P97326 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.51■□□□□ 0.39
Cdh6P97326 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh6P97326 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.51■□□□□ 0.39
Cdh6P97326 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh6P97326 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Cdh6P97326 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh6P97326 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh6P97326 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh6P97326 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh6P97326 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cdh6P97326 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh6P97326 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cdh6P97326 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.5■□□□□ 0.39
Cdh6P97326 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cdh6P97326 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh6P97326 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh6P97326 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.5■□□□□ 0.39
Cdh6P97326 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh6P97326 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh6P97326 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cdh6P97326 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh6P97326 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh6P97326 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh6P97326 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh6P97326 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms