Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm12260-201ENSMUST00000122447 411 ntBASIC11.91□□□□□ -0.5
PrkdcP97313 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.91□□□□□ -0.5
PrkdcP97313 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PrkdcP97313 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PrkdcP97313 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PrkdcP97313 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
PrkdcP97313 Gm15165-201ENSMUST00000118140 502 ntBASIC11.91□□□□□ -0.5
PrkdcP97313 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.91□□□□□ -0.5
PrkdcP97313 Gm38160-201ENSMUST00000193090 2499 ntBASIC11.91□□□□□ -0.5
PrkdcP97313 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
PrkdcP97313 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
PrkdcP97313 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PrkdcP97313 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
PrkdcP97313 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.9□□□□□ -0.5
PrkdcP97313 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
PrkdcP97313 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PrkdcP97313 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PrkdcP97313 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
PrkdcP97313 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PrkdcP97313 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PrkdcP97313 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PrkdcP97313 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
PrkdcP97313 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
PrkdcP97313 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.9□□□□□ -0.5
PrkdcP97313 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.9□□□□□ -0.5
PrkdcP97313 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.9□□□□□ -0.5
PrkdcP97313 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PrkdcP97313 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PrkdcP97313 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PrkdcP97313 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
PrkdcP97313 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
PrkdcP97313 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC11.89□□□□□ -0.51
PrkdcP97313 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkdcP97313 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkdcP97313 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.89□□□□□ -0.51
PrkdcP97313 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
PrkdcP97313 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PrkdcP97313 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkdcP97313 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkdcP97313 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkdcP97313 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkdcP97313 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkdcP97313 Gm15173-201ENSMUST00000122049 433 ntBASIC11.89□□□□□ -0.51
PrkdcP97313 Rprl3-201ENSMUST00000157400 290 ntBASIC11.89□□□□□ -0.51
PrkdcP97313 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.89□□□□□ -0.51
PrkdcP97313 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkdcP97313 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PrkdcP97313 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC11.89□□□□□ -0.51
PrkdcP97313 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PrkdcP97313 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkdcP97313 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkdcP97313 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC11.89□□□□□ -0.51
PrkdcP97313 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
PrkdcP97313 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
PrkdcP97313 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.88□□□□□ -0.51
PrkdcP97313 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.88□□□□□ -0.51
PrkdcP97313 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.88□□□□□ -0.51
PrkdcP97313 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrkdcP97313 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.88□□□□□ -0.51
PrkdcP97313 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrkdcP97313 AC121961.1-201ENSMUST00000218594 1779 ntBASIC11.88□□□□□ -0.51
PrkdcP97313 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
PrkdcP97313 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrkdcP97313 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrkdcP97313 Gm42922-201ENSMUST00000195887 2078 ntBASIC11.88□□□□□ -0.51
PrkdcP97313 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
PrkdcP97313 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
PrkdcP97313 Gm13418-201ENSMUST00000119097 944 ntBASIC11.88□□□□□ -0.51
PrkdcP97313 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrkdcP97313 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.88□□□□□ -0.51
PrkdcP97313 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
PrkdcP97313 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
PrkdcP97313 Gm27628-201ENSMUST00000184911 107 ntBASIC11.88□□□□□ -0.51
PrkdcP97313 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrkdcP97313 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrkdcP97313 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC11.88□□□□□ -0.51
PrkdcP97313 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
PrkdcP97313 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
PrkdcP97313 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
PrkdcP97313 Gm7230-201ENSMUST00000173026 815 ntBASIC11.88□□□□□ -0.51
PrkdcP97313 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
PrkdcP97313 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrkdcP97313 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrkdcP97313 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrkdcP97313 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrkdcP97313 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrkdcP97313 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrkdcP97313 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrkdcP97313 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.87□□□□□ -0.51
PrkdcP97313 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.87□□□□□ -0.51
PrkdcP97313 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrkdcP97313 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
PrkdcP97313 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrkdcP97313 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrkdcP97313 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PrkdcP97313 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrkdcP97313 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
PrkdcP97313 Mir6956-201ENSMUST00000183598 62 ntBASIC11.87□□□□□ -0.51
PrkdcP97313 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrkdcP97313 Hsf1-204ENSMUST00000226872 2104 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms